Difference between revisions of "Tiso gene 6069"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5471 RXN-5471] == * direction: ** LEFT-TO-RIGHT * common name: ** dolichyl-P-Glc:Glc1Man2GlcNAc...")
(Created page with "Category:Gene == Gene Tiso_gene_6069 == * right end position: ** 2554 * transcription direction: ** NEGATIVE * left end position: ** 148 * centisome position: ** 1.1740441...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5471 RXN-5471] ==
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== Gene Tiso_gene_6069 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2554
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* common name:
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* transcription direction:
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** dolichyl-P-Glc:Glc1Man2GlcNAc2-PPdolichol α-1,3-glucosyltransferase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.4.1.265 EC-2.4.1.265]
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** 148
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* centisome position:
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** 1.1740441   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.1.1.8-RXN]]
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** 1 [[CPD-5169]][c] '''+''' 1 [[CPD-166]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-5170]][c] '''+''' 1 [[DOLICHOLP]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl β-D-glucosyl phosphate[c] '''=>''' 1 H+[c] '''+''' 1 α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl phosphate[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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** Source: [[orthology-creinhardtii]]
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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* Reaction: [[GLYC3PDEHYDROGBIOSYN-RXN]]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
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== Pathways associated ==
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* [[annotation]]:
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* [[PWY-6118]]
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** [[pathwaytools]]:
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* [[PWY-7385]]
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*** [[in-silico_annotation]]
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* [[PWY-7411]]
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* [[PWY-5667]]
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* [[PWY0-1319]]
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* [[PWY-5981]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2554}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31310 31310]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=148}}
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** [http://www.genome.jp/dbget-bin/www_bget?R06263 R06263]
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{{#set: centisome position=1.1740441    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=1.1.1.8-RXN|GLYC3PDEHYDROGBIOSYN-RXN}}
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{{#set: common name=dolichyl-P-Glc:Glc1Man2GlcNAc2-PPdolichol α-1,3-glucosyltransferase}}
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{{#set: pathway associated=PWY-6118|PWY-7385|PWY-7411|PWY-5667|PWY0-1319|PWY-5981}}
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{{#set: ec number=EC-2.4.1.265}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:01, 21 March 2018

Gene Tiso_gene_6069

  • right end position:
    • 2554
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 148
  • centisome position:
    • 1.1740441
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6069&oldid=45277"