Difference between revisions of "MYRISTOYLACYLTRAN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9648 RXN-9648] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** 3-oxoa...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYRISTOYLACYLTRAN-RXN MYRISTOYLACYLTRAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** lip...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9648 RXN-9648] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MYRISTOYLACYLTRAN-RXN MYRISTOYLACYLTRAN-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** polyketide_synthase
+
** lipid_a_biosynthesis_acyltransferase
−
** 3-oxoacyl-synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
+
** [http://enzyme.expasy.org/EC/2.3.1.243 EC-2.3.1.243]
−
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
+
−
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[MALONYL-COA]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Butanoyl-ACPs]][c] '''=>''' 1 [[3-oxo-hexanoyl-ACPs]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** 1 [[Myristoyl-ACPs]][c] '''+''' 1 [[KDO2-LAUROYL-LIPID-IVA]][c] '''=>''' 1 [[KDO2-LIPID-A]][c] '''+''' 1 [[ACP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 malonyl-CoA[c] '''+''' 1 H+[c] '''+''' 1 a butyryl-[acp][c] '''=>''' 1 a 3-oxo-hexanoyl-[acp][c] '''+''' 1 coenzyme A[c] '''+''' 1 CO2[c]
+
** 1 a myristoyl-[acp][c] '''+''' 1 α-Kdo-(2->4)-α-Kdo-(2->6)-(lauroyl)-lipid IVA[c] '''=>''' 1 α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A[c] '''+''' 1 a holo-[acyl-carrier protein][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_13394]]
+
* Gene: [[Tiso_gene_5065]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_19302]]
+
* Gene: [[Tiso_gene_14060]]
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_14485]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_10876]]
+
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[Tiso_gene_500]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_5939]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[annotation-experimental_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_135]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_15991]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
* Gene: [[Tiso_gene_136]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
+
* [[KDO-NAGLIPASYN-PWY]], superpathway of (Kdo)2-lipid A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=KDO-NAGLIPASYN-PWY KDO-NAGLIPASYN-PWY]
−
** '''31''' reactions found over '''31''' reactions in the full pathway
+
** '''4''' reactions found over '''10''' reactions in the full pathway
 +
* [[KDO-LIPASYN-PWY]], (Kdo)2-lipid A biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=KDO-LIPASYN-PWY KDO-LIPASYN-PWY]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28438 28438]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05075 R05075]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=polyketide_synthase}}
+
{{#set: common name=lipid_a_biosynthesis_acyltransferase}}
−
{{#set: common name=3-oxoacyl-synthase}}
+
{{#set: ec number=EC-2.3.1.243}}
−
{{#set: ec number=EC-2.3.1.86}}
+
{{#set: gene associated=Tiso_gene_5065|Tiso_gene_14060}}
−
{{#set: ec number=EC-2.3.1.85}}
+
{{#set: in pathway=KDO-NAGLIPASYN-PWY|KDO-LIPASYN-PWY}}
−
{{#set: ec number=EC-2.3.1.41}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: gene associated=Tiso_gene_13394|Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_10876|Tiso_gene_500|Tiso_gene_5939|Tiso_gene_135|Tiso_gene_15991|Tiso_gene_136}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
−
{{#set: in pathway=PWY-5994}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 21:01, 21 March 2018

Reaction MYRISTOYLACYLTRAN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • lipid_a_biosynthesis_acyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a myristoyl-[acp][c] + 1 α-Kdo-(2->4)-α-Kdo-(2->6)-(lauroyl)-lipid IVA[c] => 1 α-D-Kdo-(2→4)-α-D-Kdo-(2→6)-lipid A[c] + 1 a holo-[acyl-carrier protein][c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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