Difference between revisions of "RXN0-361"

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(Created page with "Category:Gene == Gene Tiso_gene_5939 == * right end position: ** 12287 * transcription direction: ** NEGATIVE * left end position: ** 9686 * centisome position: ** 76.0342...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-361 RXN0-361] == * direction: ** LEFT-TO-RIGHT * common name: ** inosine-uridine_preferring_nu...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_5939 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-361 RXN0-361] ==
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* right end position:
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* direction:
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** 12287
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** inosine-uridine_preferring_nucleoside_hydrolase
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* left end position:
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* ec number:
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** 9686
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** [http://enzyme.expasy.org/EC/3.2.2.3 EC-3.2.2.3]
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* centisome position:
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** 76.034225   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[2.3.1.41-RXN]]
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* With identifiers:
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** Source: [[annotation-in-silico_annotation]]
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** 1 [[CYTIDINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[D-Ribofuranose]][c] '''+''' 1 [[CYTOSINE]][c]
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*** Assignment: ec-number
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* With common name(s):
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** Source: [[annotation-experimental_annotation]]
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** 1 cytidine[c] '''+''' 1 H2O[c] '''=>''' 1 D-ribofuranose[c] '''+''' 1 cytosine[c]
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*** Assignment: ec-number
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* Reaction: [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_9396]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[3-OXOACYL-ACP-SYNTH-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-10059]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-10654]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-10658]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-11474]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-11479]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-16615]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-16621]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-16625]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-16629]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9516]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9523]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9527]]
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−
** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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−
** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9531]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9535]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9539]]
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** Source: [[annotation-in-silico_annotation]]
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−
*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9632]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9648]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9650]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN-9651]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9652]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9653]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9654]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN0-2141]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN1G-368]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-445]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN1G-460]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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** Source: [[annotation-experimental_annotation]]
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−
*** Assignment: ec-number
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* Reaction: [[RXN1G-499]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[PWY-7195]], pyrimidine ribonucleosides salvage III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7195 PWY-7195]
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* Reaction: [[RXN3O-1803]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-6113]]
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* [[FASYN-ELONG-PWY]]
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* [[PWY-6519]]
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* [[PWY-7388]]
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* [[PWY-5994]]
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* [[PWY-5971]]
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* [[PWY-6282]]
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* [[PWY-5965]]
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* [[PWY-5989]]
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* [[PWY-5966]]
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* [[PWYG-321]]
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* [[FASYN-INITIAL-PWY]]
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* [[PWY-7663]]
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* [[PWY-7664]]
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* [[PWY3O-355]]
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−
* [[PWY0-862]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=12287}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27958 27958]
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{{#set: left end position=9686}}
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* LIGAND-RXN:
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{{#set: centisome position=76.034225    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R02137 R02137]
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{{#set: reaction associated=2.3.1.41-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-16615|RXN-16621|RXN-16625|RXN-16629|RXN-9516|RXN-9523|RXN-9527|RXN-9531|RXN-9535|RXN-9539|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN0-2141|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN3O-1803}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5994|PWY-5971|PWY-6282|PWY-5965|PWY-5989|PWY-5966|PWYG-321|FASYN-INITIAL-PWY|PWY-7663|PWY-7664|PWY3O-355|PWY0-862}}
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{{#set: common name=inosine-uridine_preferring_nucleoside_hydrolase}}
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{{#set: ec number=EC-3.2.2.3}}
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{{#set: gene associated=Tiso_gene_9396}}
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{{#set: in pathway=PWY-7195}}
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{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:02, 21 March 2018

Reaction RXN0-361

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • inosine-uridine_preferring_nucleoside_hydrolase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7195, pyrimidine ribonucleosides salvage III: PWY-7195
    • 1 reactions found over 2 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-361&oldid=45375"