Difference between revisions of "CPD-17927"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** riboflavin_...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17927 CPD-17927] == * common name: ** a nascent peptidoglycan with (L-alanyl-γ-D-glut...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RIBOFLAVINKIN-RXN RIBOFLAVINKIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17927 CPD-17927] ==
* direction:
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** LEFT-TO-RIGHT
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* common name:
 
* common name:
** riboflavin_kinase
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** a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide
* ec number:
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** [http://enzyme.expasy.org/EC/2.7.1.26 EC-2.7.1.26]
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* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
* With identifiers:
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* [[RXN-16649]]
** 1 [[ATP]][c] '''+''' 1 [[RIBOFLAVIN]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[FMN]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-16659]]
* With common name(s):
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== Reaction(s) known to produce the compound ==
** 1 ATP[c] '''+''' 1 riboflavin[c] '''=>''' 1 ADP[c] '''+''' 1 FMN[c] '''+''' 1 H+[c]
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== Reaction(s) of unknown directionality ==
 
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7479]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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* Gene: [[Tiso_gene_16837]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_1086]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-synechocystis]]
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== Pathways  ==
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* [[PWY66-366]], flavin biosynthesis IV (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-366 PWY66-366]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6168]], flavin biosynthesis III (fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6168 PWY-6168]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[RIBOSYN2-PWY]], flavin biosynthesis I (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=RIBOSYN2-PWY RIBOSYN2-PWY]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5523 PWY-5523]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-synechocystis]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
* RHEA:
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{{#set: common name=a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14357 14357]
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{{#set: consumed by=RXN-16649|RXN-16659}}
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R00549 R00549]
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/Q9JVY5 Q9JVY5]
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** [http://www.uniprot.org/uniprot/Q9PHS7 Q9PHS7]
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** [http://www.uniprot.org/uniprot/Q59263 Q59263]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=riboflavin_kinase}}
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{{#set: ec number=EC-2.7.1.26}}
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{{#set: gene associated=Tiso_gene_7479|Tiso_gene_16837|Tiso_gene_1086}}
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{{#set: in pathway=PWY66-366|PWY-6168|RIBOSYN2-PWY|PWY-5523}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-athaliana|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:02, 21 March 2018

Metabolite CPD-17927

  • common name:
    • a nascent peptidoglycan with (L-alanyl-γ-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine) pentapeptide
  • Synonym(s):

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links