Difference between revisions of "RXN-11840"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridinesynthase...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11840 RXN-11840] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_pseudouridinesynthase...") |
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== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_11913]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | * Gene: [[Tiso_gene_9833]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | * Gene: [[Tiso_gene_4020]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | * Gene: [[Tiso_gene_19622]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | * Gene: [[Tiso_gene_18959]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[Tiso_gene_2988]] | + | * Gene: [[Tiso_gene_2988]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | * Gene: [[Tiso_gene_4021]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | ***AUTOMATED-NAME-MATCH | + | *** Assignment: AUTOMATED-NAME-MATCH |
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[annotation]] | + | * Category: [[annotation]] |
| − | ** [[ | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** [[ | + | *** Tool: [[pathwaytools]] |
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| Line 49: | Line 49: | ||
{{#set: common name=trna_pseudouridine_synthase}} | {{#set: common name=trna_pseudouridine_synthase}} | ||
{{#set: ec number=EC-5.4.99.26}} | {{#set: ec number=EC-5.4.99.26}} | ||
| − | {{#set: gene associated=Tiso_gene_9833 | + | {{#set: gene associated=Tiso_gene_11913|Tiso_gene_9833|Tiso_gene_4020|Tiso_gene_19622|Tiso_gene_18959|Tiso_gene_2988|Tiso_gene_4021}} |
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
| + | {{#set: reconstruction source=annotation-in-silico_annotation}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
| − | |||
Latest revision as of 20:03, 21 March 2018
Contents
Reaction RXN-11840
- direction:
- LEFT-TO-RIGHT
- common name:
- trna_pseudouridinesynthase
- trna_pseudouridine_synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 tRNA-uridine65[c] => 1 tRNA-pseudouridine65[c]
- With common name(s):
- 1 a uridine65 in tRNA[c] => 1 a pseudouridine65 in tRNA[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_11913
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_9833
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_4020
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_19622
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_18959
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_2988
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_4021
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
Pathways
Reconstruction information
- Category: annotation
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
