Difference between revisions of "RXN-10847"

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(Created page with "Category:Gene == Gene Tiso_gene_17799 == * left end position: ** 2430 * transcription direction: ** POSITIVE * right end position: ** 3451 * centisome position: ** 70.3939...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10847 RXN-10847] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_17799 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10847 RXN-10847] ==
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* left end position:
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* direction:
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** 2430
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** ORF
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* right end position:
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* ec number:
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** 3451
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** [http://enzyme.expasy.org/EC/2.1.1.164 EC-2.1.1.164]
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* centisome position:
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** 70.393974   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
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* With identifiers:
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** in-silico_annotation
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** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-11756]][c] '''=>''' 1 [[CPD-11752]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
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***ec-number
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* With common name(s):
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== Pathways associated ==
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** 1 S-adenosyl-L-methionine[c] '''+''' 1 4'-O-demethylrebeccamycin[c] '''=>''' 1 rebeccamycin[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7444]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways ==
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* [[PWY-6324]], rebeccamycin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6324 PWY-6324]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=2430}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27353 27353]
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{{#set: right end position=3451}}
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* LIGAND-RXN:
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{{#set: centisome position=70.393974    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R09569 R09569]
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{{#set: reaction associated=TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-2.1.1.164}}
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{{#set: gene associated=Tiso_gene_7444}}
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{{#set: in pathway=PWY-6324}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:03, 21 March 2018

Reaction RXN-10847

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6324, rebeccamycin biosynthesis: PWY-6324
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10847&oldid=45509"