Difference between revisions of "Tiso gene 19791"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14276 RXN-14276] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Gene == Gene Tiso_gene_19791 == * right end position: ** 1844 * transcription direction: ** POSITIVE * left end position: ** 109 * centisome position: ** 5.372104...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14276 RXN-14276] ==
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== Gene Tiso_gene_19791 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1844
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.2.1.119 EC-4.2.1.119]
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** POSITIVE
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* left end position:
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** 109
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* centisome position:
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** 5.3721046   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GSHTRAN-RXN]]
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** 1 [[CPD0-2108]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-14916]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 trans-oct-2-enoyl-CoA[c] '''+''' 1 H2O[c] '''=>''' 1 (R)-3-hydroxyoctanoyl-CoA[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[GST-RXN]]
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* [[Tiso_gene_14262]]
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** Source: [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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* [[Tiso_gene_6885]]
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** Source: [[annotation-experimental_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** Assignment: ec-number
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* [[Tiso_gene_16145]]
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* Reaction: [[RXN-13673]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways ==
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*** Assignment: ec-number
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* [[PWY-6920]], 6-gingerol analog biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6920 PWY-6920]
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** Source: [[annotation-experimental_annotation]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-15680]]
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* Category: [[orthology]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: ec-number
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*** Tool: [[pantograph]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7112]]
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* [[PWY-6842]]
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* [[PWY-4061]]
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* [[PWY-7533]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=1844}}
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{{#set: ec number=EC-4.2.1.119}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: gene associated=Tiso_gene_14262|Tiso_gene_6885|Tiso_gene_16145}}
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{{#set: left end position=109}}
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{{#set: in pathway=PWY-6920}}
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{{#set: centisome position=5.3721046    }}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction associated=GSHTRAN-RXN|GST-RXN|RXN-13673|RXN-15680}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: pathway associated=PWY-7112|PWY-6842|PWY-4061|PWY-7533}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:03, 21 March 2018

Gene Tiso_gene_19791

  • right end position:
    • 1844
  • transcription direction:
    • POSITIVE
  • left end position:
    • 109
  • centisome position:
    • 5.3721046
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19791&oldid=45521"