Difference between revisions of "RXN-14384"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-195 CPD-195] == * smiles: ** CCCCCCCC(=O)[O-] * inchi key: ** InChIKey=WWZKQHOCKIZLMA-UHFFF...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14384 RXN-14384] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** c...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-195 CPD-195] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14384 RXN-14384] ==
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* smiles:
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* direction:
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** CCCCCCCC(=O)[O-]
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=WWZKQHOCKIZLMA-UHFFFAOYSA-M
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* common name:
 
* common name:
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** octanoate
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** cysteine_mitochondrial
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* molecular weight:
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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** 143.205   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.8.1.7 EC-2.8.1.7]
 
* Synonym(s):
 
* Synonym(s):
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** octanoate (n-C8:0)
 
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** C-8 acid
 
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** n-caprylic acid
 
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** caprylic acid
 
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** capryloate
 
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** 1-heptanecarboxylic acid
 
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** neo-fat 8
 
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** octanoic acid
 
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** n-octanoic acid
 
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** n-octic acid
 
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** octoic acid
 
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** n-octylic acid
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN0-5098]]
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* With identifiers:
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* [[R223-RXN]]
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** 1 [[S-CD-Apo-SP-Complex]][c] '''=>''' 1 [[CD-S-SP-Complex]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[R222-RXN]]
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** 1 an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex[c] '''=>''' 1 a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_11478]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_14710]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_4284]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[PWY-7250]], [2Fe-2S] iron-sulfur cluster biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* UM-BBD-CPD : c0047
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{{#set: direction=LEFT-TO-RIGHT}}
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* NCI:
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{{#set: common name=cysteine_mitochondrial}}
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** [http://cactus.nci.nih.gov/ncidb2.2/?nsc=5024 5024]
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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* CAS : 124-07-2
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{{#set: ec number=EC-2.8.1.7}}
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* METABOLIGHTS : MTBLC25646
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{{#set: gene associated=Tiso_gene_11478|Tiso_gene_14710|Tiso_gene_4284}}
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* PUBCHEM:
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{{#set: in pathway=PWY-7250}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=119389 119389]
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{{#set: reconstruction category=orthology|annotation}}
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* HMDB : HMDB00482
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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* LIGAND-CPD:
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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** [http://www.genome.jp/dbget-bin/www_bget?C06423 C06423]
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.106634.html 106634]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=25646 25646]
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* BIGG : octa
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{{#set: smiles=CCCCCCCC(=O)[O-]}}
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{{#set: inchi key=InChIKey=WWZKQHOCKIZLMA-UHFFFAOYSA-M}}
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{{#set: common name=octanoate}}
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{{#set: molecular weight=143.205    }}
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{{#set: common name=octanoate (n-C8:0)|C-8 acid|n-caprylic acid|caprylic acid|capryloate|1-heptanecarboxylic acid|neo-fat 8|octanoic acid|n-octanoic acid|n-octic acid|octoic acid|n-octylic acid}}
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{{#set: consumed by=RXN0-5098|R223-RXN}}
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{{#set: produced by=R222-RXN}}
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Latest revision as of 20:03, 21 March 2018

Reaction RXN-14384

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • cysteine_mitochondrial
    • cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an S-sulfanyl-[cysteine desulfurase]-[disordered-form scaffold protein] complex[c] => 1 a [cysteine desulfurase]-S-sulfanyl-[disordered-form scaffold protein] complex[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7250, [2Fe-2S] iron-sulfur cluster biosynthesis: PWY-7250
    • 10 reactions found over 10 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14384&oldid=45536"