Difference between revisions of "KDOTRANS2-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15377 CPD-15377] == * smiles: ** [CH](=O)C(O)C(O)C(O)CO * inchi key: ** InChIKey=PYMYPHUHKU...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS2-RXN KDOTRANS2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-15377 CPD-15377] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDOTRANS2-RXN KDOTRANS2-RXN] ==
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* smiles:
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* direction:
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** [CH](=O)C(O)C(O)C(O)CO
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=PYMYPHUHKUWMLA-VPENINKCSA-N
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** [http://enzyme.expasy.org/EC/2.4.99.13 EC-2.4.99.13]
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* common name:
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** aldehydo-D-xylose
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* molecular weight:
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** 150.131   
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* Synonym(s):
 
* Synonym(s):
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** linear D-xylose
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[KDO-LIPID-IVA]][c] '''+''' 1 [[CMP-KDO]][c] '''=>''' 1 [[CMP]][c] '''+''' 1 [[KDO2-LIPID-IVA]][c] '''+''' 1 [[PROTON]][c]
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* [[RXN-14503]]
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* With common name(s):
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** 1 α-Kdo-(2→6)-lipid IVA[c] '''+''' 1 CMP-3-deoxy-β-D-manno-octulosonate[c] '''=>''' 1 CMP[c] '''+''' 1 α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA[c] '''+''' 1 H+[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_14463]]
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** Source: [[orthology-athaliana]]
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== Pathways  ==
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* [[KDOSYN-PWY]], Kdo transfer to lipid IVA I: [http://metacyc.org/META/NEW-IMAGE?object=KDOSYN-PWY KDOSYN-PWY]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=644160 644160]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28062 28062]
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* CHEBI:
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* LIGAND-RXN:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=15936 15936]
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** [http://www.genome.jp/dbget-bin/www_bget?R05074 R05074]
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* METABOLIGHTS : MTBLC15936
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{{#set: direction=LEFT-TO-RIGHT}}
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* HMDB : HMDB60254
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{{#set: ec number=EC-2.4.99.13}}
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{{#set: smiles=[CH](=O)C(O)C(O)C(O)CO}}
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{{#set: gene associated=Tiso_gene_14463}}
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{{#set: inchi key=InChIKey=PYMYPHUHKUWMLA-VPENINKCSA-N}}
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{{#set: in pathway=KDOSYN-PWY}}
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{{#set: common name=aldehydo-D-xylose}}
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{{#set: reconstruction category=orthology}}
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{{#set: molecular weight=150.131    }}
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{{#set: reconstruction source=orthology-athaliana}}
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{{#set: common name=linear D-xylose}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: consumed or produced by=RXN-14503}}
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Latest revision as of 21:03, 21 March 2018

Reaction KDOTRANS2-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 α-Kdo-(2→6)-lipid IVA[c] + 1 CMP-3-deoxy-β-D-manno-octulosonate[c] => 1 CMP[c] + 1 α-Kdo-(2->4)-α-Kdo-(2->6)-lipid IVA[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • KDOSYN-PWY, Kdo transfer to lipid IVA I: KDOSYN-PWY
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=KDOTRANS2-RXN&oldid=45561"