Difference between revisions of "RXN-12376"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.13-RXN 2.7.7.13-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12376 RXN-12376] == * direction: ** LEFT-TO-RIGHT * common name: ** trna_(guanine_-n1)-methyltr...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.7.13-RXN 2.7.7.13-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12376 RXN-12376] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** trna_(guanine_-n1)-methyltransferase
 +
** probable_trna_(guanine_-n_)-dimethyltransferase_1
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/2.7.7.13 EC-2.7.7.13]
+
** [http://enzyme.expasy.org/EC/2.1.1.216 EC-2.1.1.216]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[GTP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[MANNOSE-1P]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GDP-MANNOSE]][c]
+
** 1 [[tRNA-Containing-N2-Methylguanine-26]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[tRNA-Containing-N2-dimethylguanine-26]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
** 1 GTP[c] '''+''' 1 H+[c] '''+''' 1 α-D-mannose 1-phosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 GDP-α-D-mannose[c]
+
** 1 an N2-methylguanine26 in tRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 an N2dimethylguanine26 in tRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[Tiso_gene_14704]]
+
* Gene: [[Tiso_gene_9360]]
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_16307]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
* [[PWY-5659]], GDP-mannose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5659 PWY-5659]
+
* [[PWY-6829]], tRNA methylation (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6829 PWY-6829]
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''15''' reactions in the full pathway
* [[PWY-882]], L-ascorbate biosynthesis I (L-galactose pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-882 PWY-882]
+
** '''6''' reactions found over '''8''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[orthology]]:
+
* Category: [[annotation]]
** [[pantograph]]:
+
** Source: [[annotation-experimental_annotation]]
*** [[synechocystis]]
+
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
* RHEA:
 
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15229 15229]
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00885 R00885]
 
* UNIPROT:
 
** [http://www.uniprot.org/uniprot/Q9TRF4 Q9TRF4]
 
** [http://www.uniprot.org/uniprot/Q59427 Q59427]
 
** [http://www.uniprot.org/uniprot/P41940 P41940]
 
** [http://www.uniprot.org/uniprot/O22287 O22287]
 
** [http://www.uniprot.org/uniprot/O74484 O74484]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: ec number=EC-2.7.7.13}}
+
{{#set: common name=trna_(guanine_-n1)-methyltransferase}}
{{#set: gene associated=Tiso_gene_14704}}
+
{{#set: common name=probable_trna_(guanine_-n_)-dimethyltransferase_1}}
{{#set: in pathway=PWY-5659|PWY-882}}
+
{{#set: ec number=EC-2.1.1.216}}
{{#set: reconstruction category=orthology}}
+
{{#set: gene associated=Tiso_gene_9360|Tiso_gene_16307}}
{{#set: reconstruction tool=pantograph}}
+
{{#set: in pathway=PWY-6829}}
{{#set: reconstruction source=synechocystis}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:03, 21 March 2018

Reaction RXN-12376

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trna_(guanine_-n1)-methyltransferase
    • probable_trna_(guanine_-n_)-dimethyltransferase_1
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6829, tRNA methylation (yeast): PWY-6829
    • 3 reactions found over 15 reactions in the full pathway

Reconstruction information

External links