Difference between revisions of "CARBODEHYDRAT-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9446 CPD-9446] == * smiles: ** C(O)C1(OCC(O)C(O)C(O)1) * inchi key: ** InChIKey=MPCAJMNYNOG...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] == * direction: ** REVERSIBLE * common name: ** carbonic_anhyd...")
 
(One intermediate revision by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-9446 CPD-9446] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBODEHYDRAT-RXN CARBODEHYDRAT-RXN] ==
−
* smiles:
+
* direction:
−
** C(O)C1(OCC(O)C(O)C(O)1)
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** REVERSIBLE
−
* inchi key:
+
−
** InChIKey=MPCAJMNYNOGXPB-KVTDHHQDSA-N
+
 
* common name:
 
* common name:
−
** 1,5-anhydro-D-mannitol
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** carbonic_anhydrase
−
* molecular weight:
+
** ORF
−
** 164.158   
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** beta-type_carbonic_anhydrase
 +
** gamma_carbonic_anhydrase
 +
** alpha_ca
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/4.2.1.1 EC-4.2.1.1]
 
* Synonym(s):
 
* Synonym(s):
−
** 1,5-anhydromannitol
 
  
−
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[RXN-13064]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[H2CO3]][c] '''<=>''' 1 [[WATER]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
−
== Reaction(s) of unknown directionality ==
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* With common name(s):
 +
** 1 carbonic acid[c] '''<=>''' 1 H2O[c] '''+''' 1 CO2[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_1600]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_17511]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_9852]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3056]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_20230]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_19414]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-creinhardtii]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_7660]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_19413]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_18927]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6150]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
** Source: [[orthology-creinhardtii]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
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* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=445184 445184]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10748 10748]
−
* CHEMSPIDER:
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* LIGAND-RXN:
−
** [http://www.chemspider.com/Chemical-Structure.392897.html 392897]
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** [http://www.genome.jp/dbget-bin/www_bget?R00132 R00132]
−
* CHEBI:
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* UNIPROT:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=49182 49182]
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** [http://www.uniprot.org/uniprot/P07450 P07450]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P07452 P07452]
−
** [http://www.genome.jp/dbget-bin/www_bget?C16538 C16538]
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** [http://www.uniprot.org/uniprot/P13634 P13634]
−
{{#set: smiles=C(O)C1(OCC(O)C(O)C(O)1)}}
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** [http://www.uniprot.org/uniprot/P08060 P08060]
−
{{#set: inchi key=InChIKey=MPCAJMNYNOGXPB-KVTDHHQDSA-N}}
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** [http://www.uniprot.org/uniprot/P16016 P16016]
−
{{#set: common name=1,5-anhydro-D-mannitol}}
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** [http://www.uniprot.org/uniprot/P20507 P20507]
−
{{#set: molecular weight=164.158    }}
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** [http://www.uniprot.org/uniprot/P16015 P16015]
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{{#set: common name=1,5-anhydromannitol}}
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** [http://www.uniprot.org/uniprot/P40881 P40881]
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{{#set: consumed by=RXN-13064}}
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** [http://www.uniprot.org/uniprot/Q7LZP1 Q7LZP1]
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** [http://www.uniprot.org/uniprot/Q8X938 Q8X938]
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** [http://www.uniprot.org/uniprot/P00921 P00921]
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** [http://www.uniprot.org/uniprot/P00917 P00917]
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** [http://www.uniprot.org/uniprot/P00915 P00915]
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** [http://www.uniprot.org/uniprot/P00918 P00918]
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** [http://www.uniprot.org/uniprot/P07451 P07451]
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** [http://www.uniprot.org/uniprot/P22748 P22748]
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** [http://www.uniprot.org/uniprot/P35218 P35218]
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** [http://www.uniprot.org/uniprot/P43166 P43166]
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** [http://www.uniprot.org/uniprot/P00916 P00916]
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** [http://www.uniprot.org/uniprot/P00920 P00920]
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** [http://www.uniprot.org/uniprot/P00922 P00922]
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** [http://www.uniprot.org/uniprot/O24855 O24855]
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** [http://www.uniprot.org/uniprot/Q9PIQ7 Q9PIQ7]
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** [http://www.uniprot.org/uniprot/P14141 P14141]
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** [http://www.uniprot.org/uniprot/P43165 P43165]
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** [http://www.uniprot.org/uniprot/P07630 P07630]
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** [http://www.uniprot.org/uniprot/P27139 P27139]
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** [http://www.uniprot.org/uniprot/P35219 P35219]
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** [http://www.uniprot.org/uniprot/Q7M317 Q7M317]
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** [http://www.uniprot.org/uniprot/Q7M316 Q7M316]
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** [http://www.uniprot.org/uniprot/P0ABE9 P0ABE9]
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** [http://www.uniprot.org/uniprot/P18761 P18761]
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** [http://www.uniprot.org/uniprot/P17067 P17067]
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** [http://www.uniprot.org/uniprot/P23589 P23589]
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** [http://www.uniprot.org/uniprot/P24258 P24258]
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** [http://www.uniprot.org/uniprot/P27140 P27140]
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** [http://www.uniprot.org/uniprot/P27134 P27134]
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** [http://www.uniprot.org/uniprot/P46510 P46510]
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** [http://www.uniprot.org/uniprot/P46511 P46511]
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** [http://www.uniprot.org/uniprot/P46512 P46512]
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** [http://www.uniprot.org/uniprot/P46281 P46281]
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** [http://www.uniprot.org/uniprot/P18915 P18915]
 +
** [http://www.uniprot.org/uniprot/Q41728 Q41728]
 +
** [http://www.uniprot.org/uniprot/Q41729 Q41729]
 +
** [http://www.uniprot.org/uniprot/P27141 P27141]
 +
** [http://www.uniprot.org/uniprot/Q40628 Q40628]
 +
** [http://www.uniprot.org/uniprot/Q08056 Q08056]
 +
** [http://www.uniprot.org/uniprot/P40880 P40880]
 +
** [http://www.uniprot.org/uniprot/Q39588 Q39588]
 +
** [http://www.uniprot.org/uniprot/P93108 P93108]
 +
** [http://www.uniprot.org/uniprot/Q92051 Q92051]
 +
** [http://www.uniprot.org/uniprot/O04855 O04855]
 +
** [http://www.uniprot.org/uniprot/Q41088 Q41088]
 +
** [http://www.uniprot.org/uniprot/Q41089 Q41089]
 +
** [http://www.uniprot.org/uniprot/P46513 P46513]
 +
** [http://www.uniprot.org/uniprot/O04846 O04846]
 +
{{#set: direction=REVERSIBLE}}
 +
{{#set: common name=carbonic_anhydrase}}
 +
{{#set: common name=ORF}}
 +
{{#set: common name=beta-type_carbonic_anhydrase}}
 +
{{#set: common name=gamma_carbonic_anhydrase}}
 +
{{#set: common name=alpha_ca}}
 +
{{#set: ec number=EC-4.2.1.1}}
 +
{{#set: gene associated=Tiso_gene_1600|Tiso_gene_17511|Tiso_gene_9852|Tiso_gene_3056|Tiso_gene_20230|Tiso_gene_19414|Tiso_gene_7660|Tiso_gene_19413|Tiso_gene_18927|Tiso_gene_6150}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:04, 21 March 2018

Reaction CARBODEHYDRAT-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • carbonic_anhydrase
    • ORF
    • beta-type_carbonic_anhydrase
    • gamma_carbonic_anhydrase
    • alpha_ca
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 carbonic acid[c] <=> 1 H2O[c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links







Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CARBODEHYDRAT-RXN&oldid=45661"