Difference between revisions of "RXN1G-285"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FARNESYLTRANSTRANSFERASE-RXN FARNESYLTRANSTRANSFERASE-RXN] == * direction: ** LEFT-TO-RIGHT * commo...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-285 RXN1G-285] == * direction: ** LEFT-TO-RIGHT * common name: ** trans-delta2-cis-delta9-C28...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=FARNESYLTRANSTRANSFERASE-RXN FARNESYLTRANSTRANSFERASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-285 RXN1G-285] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** farnesyltranstransferase
+
** trans-delta2-cis-delta9-C28:2-[acyl-carrier protein] reductase
−
** geranylgeranyl_pyrophosphate_synthase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.29 EC-2.5.1.29]
+
** [http://enzyme.expasy.org/EC/1.3.1.M4 EC-1.3.1.M4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c]
+
** 1 [[trans-D2-cis-D9-montanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[cis-delta9-montanoyl-ACPs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 isopentenyl diphosphate[c] '''+''' 1 (2E,6E)-farnesyl diphosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 geranylgeranyl diphosphate[c]
+
** 1 a trans-delta2-cis-delta9-C28:2-[acp][c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 a cis-delta9-C28:1-[acp][c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_16284]]
+
* Gene: [[Tiso_gene_10778]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[synechocystis]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_7305]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7736]], stellatic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7736 PWY-7736]
+
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''86''' reactions found over '''182''' reactions in the full pathway
−
* [[PWY-7492]], paspaline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7492 PWY-7492]
+
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6659]], fusicoccin A biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6659 PWY-6659]
+
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
−
* [[PWY-6691]], plaunotol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6691 PWY-6691]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
−
* [[PWY-5120]], geranylgeranyl diphosphate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5120 PWY-5120]
+
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
−
* [[PWY-7517]], brassicicene C biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7517 PWY-7517]
+
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY-7721]], methyl phomopsenoate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7721 PWY-7721]
+
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
−
* [[PWY-7720]], ophiobolin F biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7720 PWY-7720]
+
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17653 17653]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R02061 R02061]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P39464 P39464]
 
−
** [http://www.uniprot.org/uniprot/P24322 P24322]
 
−
** [http://www.uniprot.org/uniprot/P80042 P80042]
 
−
** [http://www.uniprot.org/uniprot/Q12051 Q12051]
 
−
** [http://www.uniprot.org/uniprot/P95999 P95999]
 
−
** [http://www.uniprot.org/uniprot/P48368 P48368]
 
−
** [http://www.uniprot.org/uniprot/P93227 P93227]
 
−
** [http://www.uniprot.org/uniprot/P93228 P93228]
 
−
** [http://www.uniprot.org/uniprot/Q42698 Q42698]
 
−
** [http://www.uniprot.org/uniprot/Q43133 Q43133]
 
−
** [http://www.uniprot.org/uniprot/Q42866 Q42866]
 
−
** [http://www.uniprot.org/uniprot/P54976 P54976]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=farnesyltranstransferase}}
+
{{#set: common name=trans-delta2-cis-delta9-C28:2-[acyl-carrier protein] reductase}}
−
{{#set: common name=geranylgeranyl_pyrophosphate_synthase}}
+
{{#set: ec number=EC-1.3.1.M4}}
−
{{#set: ec number=EC-2.5.1.29}}
+
{{#set: gene associated=Tiso_gene_10778}}
−
{{#set: gene associated=Tiso_gene_16284|Tiso_gene_7305}}
+
{{#set: in pathway=PWYG-321}}
−
{{#set: in pathway=PWY-7736|PWY-7492|PWY-6659|PWY-6691|PWY-5120|PWY-7517|PWY-7721|PWY-7720}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus|annotation-in-silico_annotation|orthology-athaliana|orthology-synechocystis|manual-primary_network}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 20:04, 21 March 2018

Reaction RXN1G-285

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • trans-delta2-cis-delta9-C28:2-[acyl-carrier protein] reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

"trans-delta2-cis-delta9-C28:2-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.




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