Difference between revisions of "CPD-4203"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] == * direction: ** LEFT-TO-RIGHT * common name: ** gdp-man:man_c_-pp-dol_alpha-_...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4203 CPD-4203] == * smiles: ** CC(=CCNC3(=NC=NC2(N(C1(C(C(C(O1)COP(OP(=O)([O-])[O-])([O-])=...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-4203 CPD-4203] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(=CCNC3(=NC=NC2(N(C1(C(C(C(O1)COP(OP(=O)([O-])[O-])([O-])=O)O)O))C=NC=23)))C
 
* common name:
 
* common name:
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** gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase
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** N6-(Δ2-isopentenyl)-adenosine 5'-diphosphate
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* ec number:
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* inchi key:
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** [http://enzyme.expasy.org/EC/2.4.1.131 EC-2.4.1.131]
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** InChIKey=VXMXKDAHJURHEN-SDBHATRESA-K
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* molecular weight:
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** 492.298   
 
* Synonym(s):
 
* Synonym(s):
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** iPDP
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** isopentenyladenosine riboside-5'-diphosphate
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** iPRDP
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** isopentenyladenosine-5'-diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 2 [[GDP-MANNOSE]][c] '''+''' 1 [[CPD-5162]][c] '''=>''' 2 [[GDP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[CPD-5164]][c]
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* [[RXN-4305]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 2 GDP-α-D-mannose[c] '''+''' 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 2 GDP[c] '''+''' 2 H+[c] '''+''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_15372]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_15849]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''19''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* PUBCHEM:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29523 29523]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25202829 25202829]
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEBI:
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{{#set: common name=gdp-man:man_c_-pp-dol_alpha-_-mannosyltransferase}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=73533 73533]
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{{#set: ec number=EC-2.4.1.131}}
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* LIGAND-CPD:
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{{#set: gene associated=Tiso_gene_15372|Tiso_gene_15849}}
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** [http://www.genome.jp/dbget-bin/www_bget?C16426 C16426]
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: smiles=CC(=CCNC3(=NC=NC2(N(C1(C(C(C(O1)COP(OP(=O)([O-])[O-])([O-])=O)O)O))C=NC=23)))C}}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=N6-(Δ2-isopentenyl)-adenosine 5'-diphosphate}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: inchi key=InChIKey=VXMXKDAHJURHEN-SDBHATRESA-K}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: molecular weight=492.298    }}
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{{#set: reconstruction category=annotation}}
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{{#set: common name=iPDP|isopentenyladenosine riboside-5'-diphosphate|iPRDP|isopentenyladenosine-5'-diphosphate}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: produced by=RXN-4305}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 20:04, 21 March 2018

Metabolite CPD-4203

  • smiles:
    • CC(=CCNC3(=NC=NC2(N(C1(C(C(C(O1)COP(OP(=O)([O-])[O-])([O-])=O)O)O))C=NC=23)))C
  • common name:
    • N6-(Δ2-isopentenyl)-adenosine 5'-diphosphate
  • inchi key:
    • InChIKey=VXMXKDAHJURHEN-SDBHATRESA-K
  • molecular weight:
    • 492.298
  • Synonym(s):
    • iPDP
    • isopentenyladenosine riboside-5'-diphosphate
    • iPRDP
    • isopentenyladenosine-5'-diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(=CCNC3(=NC=NC2(N(C1(C(C(C(O1)COP(OP(=O)([O-])[O-])([O-])=O)O)O))C=NC=23)))C" cannot be used as a page name in this wiki.



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