Difference between revisions of "Tiso gene 5619"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COUMARATE COUMARATE] == * smiles: ** C(=O)([O-])C=CC1(=CC=C(O)C=C1) * inchi key: ** InChIKey=NG...")
 
(Created page with "Category:Gene == Gene Tiso_gene_5619 == * right end position: ** 3425 * transcription direction: ** POSITIVE * left end position: ** 29 * centisome position: ** 0.22071695...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=COUMARATE COUMARATE] ==
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== Gene Tiso_gene_5619 ==
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* smiles:
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* right end position:
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** C(=O)([O-])C=CC1(=CC=C(O)C=C1)
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** 3425
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* inchi key:
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* transcription direction:
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** InChIKey=NGSWKAQJJWESNS-ZZXKWVIFSA-M
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** POSITIVE
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* common name:
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* left end position:
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** 4-coumarate
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** 29
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* molecular weight:
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* centisome position:
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** 163.152    
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** 0.22071695    
 
* Synonym(s):
 
* Synonym(s):
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** 4-hydroxycinnamate
 
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** 4-hydroxycinnamic acid
 
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** p-coumarate
 
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** trans-4-hydroxycinnamate
 
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** p-coumaric acid
 
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** trans-p-hydroxycinnamate
 
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** trans-4-coumarate
 
  
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== Reaction(s) known to consume the compound ==
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== Reactions associated ==
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* [[4-COUMARATE--COA-LIGASE-RXN]]
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* Reaction: [[2PGADEHYDRAT-RXN]]
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== Reaction(s) known to produce the compound ==
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** Source: [[annotation-in-silico_annotation]]
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* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
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*** Assignment: ec-number
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== Reaction(s) of unknown directionality ==
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[GLYCOLYSIS]]
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* [[PWY-6901]]
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* [[P124-PWY]]
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* [[PWY-6886]]
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* [[P341-PWY]]
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* [[PWY-1622]]
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* [[GLUCONEO-PWY]]
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* [[PWY66-399]]
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* [[PWY-1042]]
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* [[NPGLUCAT-PWY]]
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* [[PWY-5723]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-5484]]
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* [[PWY-7124]]
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* [[PWY-6142]]
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* [[PWY-7003]]
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* [[PWY-2221]]
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* [[PWY-6416]]
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* [[PWY-6163]]
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* [[PWY-7218]]
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* [[QUINATEDEG-PWY]]
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* [[P122-PWY]]
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* [[PWY-6707]]
 
== External links  ==
 
== External links  ==
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* CAS : 7400-08-0
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{{#set: right end position=3425}}
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* PUBCHEM:
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{{#set: transcription direction=POSITIVE}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=54708745 54708745]
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{{#set: left end position=29}}
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* HMDB : HMDB02035
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{{#set: centisome position=0.22071695    }}
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* LIGAND-CPD:
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{{#set: reaction associated=2PGADEHYDRAT-RXN|3-DEHYDROQUINATE-DEHYDRATASE-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00811 C00811]
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{{#set: pathway associated=GLYCOLYSIS|PWY-6901|P124-PWY|PWY-6886|P341-PWY|PWY-1622|GLUCONEO-PWY|PWY66-399|PWY-1042|NPGLUCAT-PWY|PWY-5723|ANAGLYCOLYSIS-PWY|PWY-5484|PWY-7124|PWY-6142|PWY-7003|PWY-2221|PWY-6416|PWY-6163|PWY-7218|QUINATEDEG-PWY|P122-PWY|PWY-6707}}
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* CHEMSPIDER:
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** [http://www.chemspider.com/Chemical-Structure.4450678.html 4450678]
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* CHEBI:
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=12876 12876]
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* METABOLIGHTS : MTBLC12876
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{{#set: smiles=C(=O)([O-])C=CC1(=CC=C(O)C=C1)}}
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{{#set: inchi key=InChIKey=NGSWKAQJJWESNS-ZZXKWVIFSA-M}}
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{{#set: common name=4-coumarate}}
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{{#set: molecular weight=163.152    }}
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{{#set: common name=4-hydroxycinnamate|4-hydroxycinnamic acid|p-coumarate|trans-4-hydroxycinnamate|p-coumaric acid|trans-p-hydroxycinnamate|trans-4-coumarate}}
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{{#set: consumed by=4-COUMARATE--COA-LIGASE-RXN}}
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{{#set: produced by=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN}}
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Latest revision as of 20:05, 21 March 2018

Gene Tiso_gene_5619

  • right end position:
    • 3425
  • transcription direction:
    • POSITIVE
  • left end position:
    • 29
  • centisome position:
    • 0.22071695
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5619&oldid=45818"