Difference between revisions of "KDO-8PSYNTH-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12303 CPD-12303] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDO-8PSYNTH-RXN KDO-8PSYNTH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** bifunctional_kd...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12303 CPD-12303] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=KDO-8PSYNTH-RXN KDO-8PSYNTH-RXN] ==
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* smiles:
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* direction:
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)C(O)C(CO)O1))([O-])=O)C)C)C)C)C)C)C
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=KCROFJGXXSCHGA-YGMFIXCYSA-K
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* common name:
 
* common name:
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** undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine
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** bifunctional_kdo_8-p_synthase_dtdp-6-deoxy-l-hexose_3-o-methyltransferase
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* molecular weight:
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* ec number:
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** 1598.955   
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** [http://enzyme.expasy.org/EC/2.5.1.55 EC-2.5.1.55]
 
* Synonym(s):
 
* Synonym(s):
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** mur2Ac(oyl-L-Ala-γ-D-Glu-L-Lys-D-Ala)-diphosphoundecaprenol
 
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** lipid I (tetrapeptide)
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-11347]]
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** 1 [[CPD-18118]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[KDO-8P]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 D-arabinofuranose 5-phosphate[c] '''+''' 1 H2O[c] '''+''' 1 phosphoenolpyruvate[c] '''=>''' 1 phosphate[c] '''+''' 1 3-deoxy-D-manno-octulosonate 8-phosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_1350]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_20348]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-7674]], CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7674 PWY-7674]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-1269]], CMP-3-deoxy-D-manno-octulosonate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1269 PWY-1269]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657616 90657616]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14053 14053]
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(C)=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(OP([O-])(=O)OC1(C(NC(=O)C)C(OC(C)C(=O)NC(C)C(=O)NC(C(=O)[O-])CCC(=O)NC(CCCC[N+])C(NC(C)C(=O)[O-])=O)C(O)C(CO)O1))([O-])=O)C)C)C)C)C)C)C}}
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* LIGAND-RXN:
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{{#set: inchi key=InChIKey=KCROFJGXXSCHGA-YGMFIXCYSA-K}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03254 R03254]
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{{#set: common name=undecaprenyl-diphospho-N-acetylmuramoyl-L-alanyl-γ-D-glutamyl-L-lysyl- D-alanine}}
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* UNIPROT:
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{{#set: molecular weight=1598.955    }}
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** [http://www.uniprot.org/uniprot/Q9PIB8 Q9PIB8]
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{{#set: common name=mur2Ac(oyl-L-Ala-γ-D-Glu-L-Lys-D-Ala)-diphosphoundecaprenol|lipid I (tetrapeptide)}}
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** [http://www.uniprot.org/uniprot/P45251 P45251]
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{{#set: produced by=RXN-11347}}
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** [http://www.uniprot.org/uniprot/Q9JU48 Q9JU48]
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** [http://www.uniprot.org/uniprot/P0A715 P0A715]
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** [http://www.uniprot.org/uniprot/O50044 O50044]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=bifunctional_kdo_8-p_synthase_dtdp-6-deoxy-l-hexose_3-o-methyltransferase}}
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{{#set: ec number=EC-2.5.1.55}}
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{{#set: gene associated=Tiso_gene_1350|Tiso_gene_20348}}
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{{#set: in pathway=PWY-7674|PWY-1269}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:05, 21 March 2018

Reaction KDO-8PSYNTH-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • bifunctional_kdo_8-p_synthase_dtdp-6-deoxy-l-hexose_3-o-methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 D-arabinofuranose 5-phosphate[c] + 1 H2O[c] + 1 phosphoenolpyruvate[c] => 1 phosphate[c] + 1 3-deoxy-D-manno-octulosonate 8-phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7674, CMP-8-amino-3,8-dideoxy-D-manno-octulosonate biosynthesis: PWY-7674
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-1269, CMP-3-deoxy-D-manno-octulosonate biosynthesis: PWY-1269
    • 1 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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