Difference between revisions of "6.3.5.6-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFITE-REDUCTASE-FERREDOXIN-RXN SULFITE-REDUCTASE-FERREDOXIN-RXN] == * direction: ** LEFT-TO-RIGHT...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamyl-tRNA(Gln) amid...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SULFITE-REDUCTASE-FERREDOXIN-RXN SULFITE-REDUCTASE-FERREDOXIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** Glutamyl-tRNA(Gln) amidotransferase subunit A
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.8.7.1 EC-1.8.7.1]
+
** [http://enzyme.expasy.org/EC/6.3.5.6 EC-6.3.5.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 8 [[PROTON]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''+''' 1 [[SO3]][c] '''=>''' 1 [[HS]][c] '''+''' 3 [[WATER]][c] '''+''' 6 [[Oxidized-ferredoxins]][c]
+
** 1 [[ATP]][c] '''+''' 1 [[L-aspartyl-tRNAAsn]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
−
** 8 H+[c] '''+''' 6 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 1 sulfite[c] '''=>''' 1 hydrogen sulfide[c] '''+''' 3 H2O[c] '''+''' 6 an oxidized ferredoxin [iron-sulfur] cluster[c]
+
** 1 ATP[c] '''+''' 1 an L-aspartyl-[tRNAAsn][c] '''+''' 1 H2O[c] '''+''' 1 L-glutamine[c] '''=>''' 1 H+[c] '''+''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_10247]]
+
* Gene: [[Tiso_gene_9908]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[orthology-esiliculosus]]
−
** [[pantograph]]-[[synechocystis]]
+
* Gene: [[Tiso_gene_12219]]
−
** [[pantograph]]-[[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[SULFMETII-PWY]], sulfate reduction II (assimilatory): [http://metacyc.org/META/NEW-IMAGE?object=SULFMETII-PWY SULFMETII-PWY]
+
* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
 
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14513 14513]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00859 R00859]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04212 R04212]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/O82802 O82802]
+
−
** [http://www.uniprot.org/uniprot/Q42590 Q42590]
+
−
** [http://www.uniprot.org/uniprot/P72854 P72854]
+
−
** [http://www.uniprot.org/uniprot/O23813 O23813]
+
−
** [http://www.uniprot.org/uniprot/Q9LZ66 Q9LZ66]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-1.8.7.1}}
+
{{#set: common name=Glutamyl-tRNA(Gln) amidotransferase subunit A}}
−
{{#set: gene associated=Tiso_gene_10247}}
+
{{#set: ec number=EC-6.3.5.6}}
−
{{#set: in pathway=SULFMETII-PWY}}
+
{{#set: gene associated=Tiso_gene_9908|Tiso_gene_12219}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: in pathway=PWY490-4}}
−
{{#set: reconstruction source=orthology-athaliana|orthology-synechocystis|orthology-esiliculosus}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:05, 21 March 2018

Reaction 6.3.5.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glutamyl-tRNA(Gln) amidotransferase subunit A
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 an L-aspartyl-[tRNAAsn][c] + 1 H2O[c] + 1 L-glutamine[c] => 1 H+[c] + 1 an L-asparaginyl-[tRNAasn][c] + 1 phosphate[c] + 1 ADP[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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