Difference between revisions of "6.3.5.6-RXN"

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(Created page with "Category:Gene == Gene Tiso_gene_3107 == * right end position: ** 4192 * transcription direction: ** POSITIVE * left end position: ** 1879 * centisome position: ** 10.77099...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Glutamyl-tRNA(Gln) amid...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene Tiso_gene_3107 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] ==
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* right end position:
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* direction:
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** 4192
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** POSITIVE
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** Glutamyl-tRNA(Gln) amidotransferase subunit A
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* left end position:
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* ec number:
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** 1879
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** [http://enzyme.expasy.org/EC/6.3.5.6 EC-6.3.5.6]
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* centisome position:
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** 10.770994   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* Reaction: [[FRUCTOKINASE-RXN]]
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* With identifiers:
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** Source: [[annotation-in-silico_annotation]]
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** 1 [[ATP]][c] '''+''' 1 [[L-aspartyl-tRNAAsn]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c]
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*** Assignment: automated-name-match
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* With common name(s):
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** Source: [[annotation-experimental_annotation]]
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** 1 ATP[c] '''+''' 1 an L-aspartyl-[tRNAAsn][c] '''+''' 1 H2O[c] '''+''' 1 L-glutamine[c] '''=>''' 1 H+[c] '''+''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 L-glutamate[c]
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*** Assignment: automated-name-match
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** Source: [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-creinhardtii]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-creinhardtii]]
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* Gene: [[Tiso_gene_9908]]
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* Reaction: [[GLUCOKIN-RXN]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_12219]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[HEXOKINASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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*** Assignment: AUTOMATED-NAME-MATCH
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* Reaction: [[MANNKIN-RXN]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
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*** Assignment: automated-name-match
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** '''2''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Assignment: automated-name-match
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*** Tool: [[pathwaytools]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[PWY-3801]]
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* [[PWY-7385]]
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* [[PWY0-1182]]
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* [[SUCROSEUTIL2-PWY]]
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* [[PWY-4101]]
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* [[PWY-2722]]
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* [[PWY-2723]]
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* [[PWY-5384]]
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* [[P124-PWY]]
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* [[TREDEGLOW-PWY]]
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* [[PWY-621]]
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* [[PWY-6992]]
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* [[ANAGLYCOLYSIS-PWY]]
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* [[PWY-6140]]
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* [[PWY-5661]]
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* [[PWY-7238]]
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* [[GLYCOCAT-PWY]]
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* [[SUCUTIL-PWY]]
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* [[GLUCOSE1PMETAB-PWY]]
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* [[PWY-6531]]
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* [[PWY-5514]]
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* [[P122-PWY]]
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* [[PWY-3861]]
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== External links  ==
 
== External links  ==
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{{#set: right end position=4192}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14513 14513]
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{{#set: left end position=1879}}
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* LIGAND-RXN:
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{{#set: centisome position=10.770994    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04212 R04212]
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{{#set: reaction associated=FRUCTOKINASE-RXN|GLUCOKIN-RXN|HEXOKINASE-RXN|MANNKIN-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-3801|PWY-7385|PWY0-1182|SUCROSEUTIL2-PWY|PWY-4101|PWY-2722|PWY-2723|PWY-5384|P124-PWY|TREDEGLOW-PWY|PWY-621|PWY-6992|ANAGLYCOLYSIS-PWY|PWY-6140|PWY-5661|PWY-7238|GLYCOCAT-PWY|SUCUTIL-PWY|GLUCOSE1PMETAB-PWY|PWY-6531|PWY-5514|P122-PWY|PWY-3861}}
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{{#set: common name=Glutamyl-tRNA(Gln) amidotransferase subunit A}}
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{{#set: ec number=EC-6.3.5.6}}
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{{#set: gene associated=Tiso_gene_9908|Tiso_gene_12219}}
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{{#set: in pathway=PWY490-4}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 20:05, 21 March 2018

Reaction 6.3.5.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Glutamyl-tRNA(Gln) amidotransferase subunit A
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 an L-aspartyl-[tRNAAsn][c] + 1 H2O[c] + 1 L-glutamine[c] => 1 H+[c] + 1 an L-asparaginyl-[tRNAasn][c] + 1 phosphate[c] + 1 ADP[c] + 1 L-glutamate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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