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| [[Category:Reaction]] | | [[Category:Reaction]] |
− | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CARBPSYN-RXN CARBPSYN-RXN] == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AODAA AODAA] == |
| * direction: | | * direction: |
| ** LEFT-TO-RIGHT | | ** LEFT-TO-RIGHT |
| * common name: | | * common name: |
− | ** carbamoyl_phosphate_synthetase | + | ** acetylornithine deacetylase aminoacylase |
− | * ec number:
| + | |
− | ** [http://enzyme.expasy.org/EC/6.3.5.5 EC-6.3.5.5]
| + | |
| * Synonym(s): | | * Synonym(s): |
| | | |
| == Reaction Formula == | | == Reaction Formula == |
| * With identifiers: | | * With identifiers: |
− | ** 1 [[WATER]][c] '''+''' 1 [[HCO3]][c] '''+''' 2 [[ATP]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[Pi]][c] '''+''' 2 [[ADP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 1 [[GLT]][c] | + | ** 1.0 [[WATER]][c] '''+''' 1.0 [[N-ALPHA-ACETYLORNITHINE]][c] '''=>''' 1.0 [[ACET]][c] '''+''' 1.0 [[L-ORNITHINE]][c] |
| * With common name(s): | | * With common name(s): |
− | ** 1 H2O[c] '''+''' 1 hydrogencarbonate[c] '''+''' 2 ATP[c] '''+''' 1 L-glutamine[c] '''=>''' 1 phosphate[c] '''+''' 2 ADP[c] '''+''' 2 H+[c] '''+''' 1 carbamoyl phosphate[c] '''+''' 1 L-glutamate[c] | + | ** 1.0 H2O[c] '''+''' 1.0 N-acetyl-L-ornithine[c] '''=>''' 1.0 acetate[c] '''+''' 1.0 L-ornithine[c] |
| | | |
| == Genes associated with this reaction == | | == Genes associated with this reaction == |
| Genes have been associated with this reaction based on different elements listed below. | | Genes have been associated with this reaction based on different elements listed below. |
− | * [[Tiso_gene_4685]] | + | * Gene: [[Tiso_gene_16201]] |
− | ** EXPERIMENTAL_ANNOTATION | + | ** Source: [[orthology-creinhardtii]] |
− | ***AUTOMATED-NAME-MATCH
| + | |
− | ** [[pantograph]]-[[esiliculosus]]
| + | |
− | * [[Tiso_gene_4976]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | * [[Tiso_gene_4975]]
| + | |
− | ** IN-SILICO_ANNOTATION
| + | |
− | ***EC-NUMBER
| + | |
− | ** EXPERIMENTAL_ANNOTATION
| + | |
− | ***AUTOMATED-NAME-MATCH
| + | |
| == Pathways == | | == Pathways == |
− | * [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYN-PWY ARGSYN-PWY]
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− | ** '''5''' reactions found over '''6''' reactions in the full pathway
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− | * [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5154 PWY-5154]
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− | ** '''7''' reactions found over '''9''' reactions in the full pathway
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− | * [[PWY-7790]], UMP biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7790 PWY-7790]
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− | ** '''6''' reactions found over '''6''' reactions in the full pathway
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− | * [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle): [http://metacyc.org/META/NEW-IMAGE?object=ARGSYNBSUB-PWY ARGSYNBSUB-PWY]
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− | ** '''9''' reactions found over '''9''' reactions in the full pathway
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− | * [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7400 PWY-7400]
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− | ** '''7''' reactions found over '''9''' reactions in the full pathway
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− | * [[PWY-7791]], UMP biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7791 PWY-7791]
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− | ** '''5''' reactions found over '''6''' reactions in the full pathway
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− | * [[PWY-5686]], UMP biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5686 PWY-5686]
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− | ** '''6''' reactions found over '''6''' reactions in the full pathway
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| == Reconstruction information == | | == Reconstruction information == |
− | * [[orthology]]: | + | * Category: [[orthology]] |
− | ** [[pantograph]]: | + | ** Source: [[orthology-creinhardtii]] |
− | *** [[esiliculosus]]
| + | *** Tool: [[pantograph]] |
− | * [[manual]]: | + | |
− | ** [[primary_network]] | + | |
− | * [[annotation]]:
| + | |
− | ** [[pathwaytools]]:
| + | |
− | *** [[experimental_annotation]]
| + | |
− | *** [[in-silico_annotation]]
| + | |
| == External links == | | == External links == |
− | * LIGAND-RXN:
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− | ** [http://www.genome.jp/dbget-bin/www_bget?R00575 R00575]
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− | * UNIPROT:
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− | ** [http://www.uniprot.org/uniprot/P08955 P08955]
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− | ** [http://www.uniprot.org/uniprot/P13258 P13258]
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− | ** [http://www.uniprot.org/uniprot/P38099 P38099]
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− | ** [http://www.uniprot.org/uniprot/P27708 P27708]
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− | ** [http://www.uniprot.org/uniprot/Q91437 Q91437]
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− | ** [http://www.uniprot.org/uniprot/O28994 O28994]
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− | ** [http://www.uniprot.org/uniprot/P57689 P57689]
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− | ** [http://www.uniprot.org/uniprot/P38098 P38098]
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− | ** [http://www.uniprot.org/uniprot/Q9WZ27 Q9WZ27]
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− | ** [http://www.uniprot.org/uniprot/Q9PMG8 Q9PMG8]
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− | ** [http://www.uniprot.org/uniprot/Q9JXW8 Q9JXW8]
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− | ** [http://www.uniprot.org/uniprot/Q9JVZ6 Q9JVZ6]
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− | ** [http://www.uniprot.org/uniprot/P25993 P25993]
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− | ** [http://www.uniprot.org/uniprot/Q9PIL7 Q9PIL7]
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− | ** [http://www.uniprot.org/uniprot/P25994 P25994]
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− | ** [http://www.uniprot.org/uniprot/Q9JW02 Q9JW02]
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− | ** [http://www.uniprot.org/uniprot/O25577 O25577]
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− | ** [http://www.uniprot.org/uniprot/P52557 P52557]
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− | ** [http://www.uniprot.org/uniprot/P46537 P46537]
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− | ** [http://www.uniprot.org/uniprot/P18185 P18185]
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− | ** [http://www.uniprot.org/uniprot/P07259 P07259]
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− | ** [http://www.uniprot.org/uniprot/P20054 P20054]
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− | ** [http://www.uniprot.org/uniprot/P05990 P05990]
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− | ** [http://www.uniprot.org/uniprot/P14845 P14845]
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− | ** [http://www.uniprot.org/uniprot/Q06950 Q06950]
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− | ** [http://www.uniprot.org/uniprot/Q92115 Q92115]
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− | ** [http://www.uniprot.org/uniprot/Q09794 Q09794]
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− | ** [http://www.uniprot.org/uniprot/P03965 P03965]
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− | ** [http://www.uniprot.org/uniprot/P07258 P07258]
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− | ** [http://www.uniprot.org/uniprot/P00968 P00968]
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− | ** [http://www.uniprot.org/uniprot/P0A6F1 P0A6F1]
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− | ** [http://www.uniprot.org/uniprot/P93345 P93345]
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− | ** [http://www.uniprot.org/uniprot/Q27732 Q27732]
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− | ** [http://www.uniprot.org/uniprot/Q27448 Q27448]
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− | ** [http://www.uniprot.org/uniprot/O50236 O50236]
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− | ** [http://www.uniprot.org/uniprot/O94313 O94313]
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− | ** [http://www.uniprot.org/uniprot/Q59968 Q59968]
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− | ** [http://www.uniprot.org/uniprot/Q59969 Q59969]
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− | ** [http://www.uniprot.org/uniprot/O50301 O50301]
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− | ** [http://www.uniprot.org/uniprot/O50302 O50302]
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| {{#set: direction=LEFT-TO-RIGHT}} | | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: common name=carbamoyl_phosphate_synthetase}} | + | {{#set: common name=acetylornithine deacetylase aminoacylase}} |
− | {{#set: ec number=EC-6.3.5.5}}
| + | {{#set: gene associated=Tiso_gene_16201}} |
− | {{#set: gene associated=Tiso_gene_4685|Tiso_gene_4976|Tiso_gene_4975}} | + | {{#set: in pathway=}} |
− | {{#set: in pathway=ARGSYN-PWY|PWY-5154|PWY-7790|ARGSYNBSUB-PWY|PWY-7400|PWY-7791|PWY-5686}} | + | |
| {{#set: reconstruction category=orthology}} | | {{#set: reconstruction category=orthology}} |
| + | {{#set: reconstruction source=orthology-creinhardtii}} |
| {{#set: reconstruction tool=pantograph}} | | {{#set: reconstruction tool=pantograph}} |
− | {{#set: reconstruction source=esiliculosus}}
| |
− | {{#set: reconstruction category=manual}}
| |
− | {{#set: reconstruction source=primary_network}}
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− | {{#set: reconstruction category=annotation}}
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− | {{#set: reconstruction tool=pathwaytools}}
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− | {{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
| |
Genes have been associated with this reaction based on different elements listed below.