Difference between revisions of "RXN-10616"

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(Created page with "Category:Gene == Gene Tiso_gene_4191 == * left end position: ** 11562 * transcription direction: ** NEGATIVE * right end position: ** 14920 * centisome position: ** 75.910...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10616 RXN-10616] == * direction: ** LEFT-TO-RIGHT * common name: ** exostosin_family_protein *...")
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
+
[[Category:Reaction]]
== Gene Tiso_gene_4191 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10616 RXN-10616] ==
* left end position:
+
* direction:
** 11562
+
** LEFT-TO-RIGHT
* transcription direction:
+
* common name:
** NEGATIVE
+
** exostosin_family_protein
* right end position:
+
* ec number:
** 14920
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** [http://enzyme.expasy.org/EC/2.4.1.17 EC-2.4.1.17]
* centisome position:
+
** 75.91097   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[ACYLCOASYN-RXN]]
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* With identifiers:
** in-silico_annotation
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** 1 [[CPD-11403]][c] '''+''' 1 [[UDP-GLUCURONATE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-11409]][c] '''+''' 1 [[UDP]][c]
***ec-number
+
* With common name(s):
** experimental_annotation
+
** 1 tetraiodothyroacetate[c] '''+''' 1 UDP-α-D-glucuronate[c] '''=>''' 1 H+[c] '''+''' 1 tetraiodothyroacetate ether glucuronide[c] '''+''' 1 UDP[c]
***ec-number
+
 
* [[LINOLENOYL-RXN]]
+
== Genes associated with this reaction  ==
** in-silico_annotation
+
Genes have been associated with this reaction based on different elements listed below.
***ec-number
+
* Gene: [[Tiso_gene_14140]]
** experimental_annotation
+
** Source: [[annotation-in-silico_annotation]]
***ec-number
+
*** Assignment: EC-NUMBER
* [[R223-RXN]]
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* Gene: [[Tiso_gene_14141]]
** in-silico_annotation
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** Source: [[annotation-in-silico_annotation]]
***ec-number
+
*** Assignment: EC-NUMBER
** experimental_annotation
+
== Pathways ==
***ec-number
+
* [[PWY-6261]], thyroid hormone metabolism II (via conjugation and/or degradation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6261 PWY-6261]
* [[RXN-12184]]
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** '''11''' reactions found over '''15''' reactions in the full pathway
** in-silico_annotation
+
== Reconstruction information  ==
***ec-number
+
* Category: [[annotation]]
** experimental_annotation
+
** Source: [[annotation-in-silico_annotation]]
***ec-number
+
*** Tool: [[pathwaytools]]
* [[RXN-12978]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-13290]]
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** in-silico_annotation
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***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-13614]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-16380]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN-16389]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN-16393]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN-16401]]
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** in-silico_annotation
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***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN-16402]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN-16415]]
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** in-silico_annotation
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***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN-16418]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN-7904]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN-9623]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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** [[pantograph]]-[[athaliana]]
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* [[RXN-9644]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN-9673]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN0-7238]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN0-7239]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN0-7248]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN66-469]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[RXN66-477]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN66-480]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN66-483]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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* [[RXN66-484]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
+
* [[TRANS-RXN0-623]]
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** in-silico_annotation
+
***ec-number
+
** experimental_annotation
+
***ec-number
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== Pathways associated ==
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* [[PWY-6920]]
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* [[P221-PWY]]
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* [[PWY-321]]
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* [[PWY-5972]]
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* [[PWY-5971]]
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* [[PWY-7033]]
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* [[PWY-5136]]
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* [[PWY66-389]]
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* [[PWY-7288]]
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* [[PWY-6733]]
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* [[PWY-7094]]
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* [[PWY66-391]]
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* [[FAO-PWY]]
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* [[PWY-1121]]
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* [[PWY-6873]]
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* [[PWY-5147]]
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* [[PWY-5143]]
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* [[PWY-5885]]
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* [[PWY-7724]]
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* [[PWY-6001]]
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* [[PWY-6000]]
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* [[PWY-7049]]
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* [[PWY66-387]]
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* [[PWY-5989]]
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* [[PWY-6803]]
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* [[PWY66-388]]
+
 
== External links  ==
 
== External links  ==
{{#set: left end position=11562}}
+
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
+
{{#set: common name=exostosin_family_protein}}
{{#set: right end position=14920}}
+
{{#set: ec number=EC-2.4.1.17}}
{{#set: centisome position=75.91097    }}
+
{{#set: gene associated=Tiso_gene_14140|Tiso_gene_14141}}
{{#set: reaction associated=ACYLCOASYN-RXN|LINOLENOYL-RXN|R223-RXN|RXN-12184|RXN-12978|RXN-13290|RXN-13614|RXN-16380|RXN-16389|RXN-16393|RXN-16401|RXN-16402|RXN-16415|RXN-16418|RXN-7904|RXN-9623|RXN-9644|RXN-9673|RXN0-7238|RXN0-7239|RXN0-7248|RXN66-469|RXN66-477|RXN66-480|RXN66-483|RXN66-484|TRANS-RXN0-623}}
+
{{#set: in pathway=PWY-6261}}
{{#set: pathway associated=PWY-6920|P221-PWY|PWY-321|PWY-5972|PWY-5971|PWY-7033|PWY-5136|PWY66-389|PWY-7288|PWY-6733|PWY-7094|PWY66-391|FAO-PWY|PWY-1121|PWY-6873|PWY-5147|PWY-5143|PWY-5885|PWY-7724|PWY-6001|PWY-6000|PWY-7049|PWY66-387|PWY-5989|PWY-6803|PWY66-388}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:05, 21 March 2018

Reaction RXN-10616

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • exostosin_family_protein
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 tetraiodothyroacetate[c] + 1 UDP-α-D-glucuronate[c] => 1 H+[c] + 1 tetraiodothyroacetate ether glucuronide[c] + 1 UDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6261, thyroid hormone metabolism II (via conjugation and/or degradation): PWY-6261
    • 11 reactions found over 15 reactions in the full pathway

Reconstruction information

External links