Difference between revisions of "Tiso gene 13092"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9952 RXN-9952] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyisobutyrate_mitochon...")
(Created page with "Category:Gene == Gene Tiso_gene_13092 == * right end position: ** 2421 * transcription direction: ** POSITIVE * left end position: ** 26 * centisome position: ** 0.3977359...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9952 RXN-9952] ==
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== Gene Tiso_gene_13092 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2421
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* common name:
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* transcription direction:
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** 3-hydroxyisobutyrate_mitochondrial
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** POSITIVE
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** 6-phosphogluconate_decarboxylating
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* left end position:
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** ORF
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** 26
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/1.1.1.44 EC-1.1.1.44]
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** 0.39773598   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[GDPMANDEHYDRA-RXN]]
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** 1 [[CPD-2961]][c] '''+''' 1 [[NADP]][c] '''=>''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADPH]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 D-gluconate 6-phosphate[c] '''+''' 1 NADP+[c] '''=>''' 1 D-ribulose 5-phosphate[c] '''+''' 1 CO2[c] '''+''' 1 NADPH[c]
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== Pathways associated ==
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* [[GDPRHAMSYN-PWY]]
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== Genes associated with this reaction  ==
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* [[PWY-66]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5740]]
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* [[Tiso_gene_777]]
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* [[PWY-7573]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-5738]]
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* [[Tiso_gene_19590]]
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* [[PWY-5739]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_91]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_20238]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_7157]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[esiliculosus]]
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* [[manual]]:
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** [[primary_network]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=2421}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=26}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01528 R01528]
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{{#set: centisome position=0.39773598    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=GDPMANDEHYDRA-RXN}}
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{{#set: common name=3-hydroxyisobutyrate_mitochondrial}}
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{{#set: pathway associated=GDPRHAMSYN-PWY|PWY-66|PWY-5740|PWY-7573|PWY-5738|PWY-5739}}
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{{#set: common name=6-phosphogluconate_decarboxylating}}
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{{#set: common name=ORF}}
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{{#set: ec number=EC-1.1.1.44}}
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{{#set: gene associated=Tiso_gene_777|Tiso_gene_19590|Tiso_gene_91|Tiso_gene_20238|Tiso_gene_7157}}
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{{#set: in pathway=OXIDATIVEPENT-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction source=primary_network}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 21:06, 21 March 2018

Gene Tiso_gene_13092

  • right end position:
    • 2421
  • transcription direction:
    • POSITIVE
  • left end position:
    • 26
  • centisome position:
    • 0.39773598
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13092&oldid=45962"