Difference between revisions of "RXN-9952"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXAL_PHOSPHATE PYRIDOXAL_PHOSPHATE] == * smiles: ** CC1(N=CC(=C(C=1O)C=O)COP(=O)([O-])[O-]...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9952 RXN-9952] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxyisobutyrate_mitochon...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXAL_PHOSPHATE PYRIDOXAL_PHOSPHATE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9952 RXN-9952] ==
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* smiles:
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* direction:
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** CC1(N=CC(=C(C=1O)C=O)COP(=O)([O-])[O-])
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=NGVDGCNFYWLIFO-UHFFFAOYSA-L
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* common name:
 
* common name:
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** pyridoxal 5'-phosphate
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** 3-hydroxyisobutyrate_mitochondrial
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* molecular weight:
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** 6-phosphogluconate_decarboxylating
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** 245.128   
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** ORF
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* ec number:
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** [http://enzyme.expasy.org/EC/1.1.1.44 EC-1.1.1.44]
 
* Synonym(s):
 
* Synonym(s):
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** PLP
 
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** pyridoxal phosphate
 
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** pyridoxal-5P
 
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** pyridoxal 5-phosphate
 
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** pyridoxal-P
 
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** vitamin B6
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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* [[3.1.3.74-RXN]]
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[NADP]][c] '''+''' 1 [[CPD-2961]][c] '''=>''' 1 [[NADPH]][c] '''+''' 1 [[RIBULOSE-5P]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[PNPOXI-RXN]]
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* With common name(s):
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* [[PMPOXI-RXN]]
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** 1 NADP+[c] '''+''' 1 D-gluconate 6-phosphate[c] '''=>''' 1 NADPH[c] '''+''' 1 D-ribulose 5-phosphate[c] '''+''' 1 CO2[c]
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* [[PYRIDOXKIN-RXN]]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_7157]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_19590]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_91]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_777]]
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** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_20238]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways  ==
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* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[manual]]
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** Source: [[manual-primary_network]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* CAS : 54-47-7
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* RHEA:
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* METABOLIGHTS : MTBLC597326
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10116 10116]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=644168 644168]
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** [http://www.genome.jp/dbget-bin/www_bget?R01528 R01528]
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* HMDB : HMDB01491
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=3-hydroxyisobutyrate_mitochondrial}}
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** [http://www.genome.jp/dbget-bin/www_bget?C00018 C00018]
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{{#set: common name=6-phosphogluconate_decarboxylating}}
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* CHEMSPIDER:
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{{#set: common name=ORF}}
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** [http://www.chemspider.com/Chemical-Structure.559203.html 559203]
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{{#set: ec number=EC-1.1.1.44}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_7157|Tiso_gene_19590|Tiso_gene_91|Tiso_gene_777|Tiso_gene_20238}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=597326 597326]
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{{#set: in pathway=OXIDATIVEPENT-PWY}}
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* BIGG : pydx5p
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{{#set: reconstruction category=orthology|manual|annotation}}
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{{#set: smiles=CC1(N=CC(=C(C=1O)C=O)COP(=O)([O-])[O-])}}
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{{#set: reconstruction source=manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
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{{#set: inchi key=InChIKey=NGVDGCNFYWLIFO-UHFFFAOYSA-L}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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{{#set: common name=pyridoxal 5'-phosphate}}
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{{#set: molecular weight=245.128    }}
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{{#set: common name=PLP|pyridoxal phosphate|pyridoxal-5P|pyridoxal 5-phosphate|pyridoxal-P|vitamin B6}}
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{{#set: consumed by=3.1.3.74-RXN}}
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{{#set: produced by=PNPOXI-RXN|PMPOXI-RXN|PYRIDOXKIN-RXN}}
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Latest revision as of 20:06, 21 March 2018

Reaction RXN-9952

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxyisobutyrate_mitochondrial
    • 6-phosphogluconate_decarboxylating
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 NADP+[c] + 1 D-gluconate 6-phosphate[c] => 1 NADPH[c] + 1 D-ribulose 5-phosphate[c] + 1 CO2[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






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