Difference between revisions of "Tiso gene 6458"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.39-RXN 3.2.1.39-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Tiso_gene_6458 == * right end position: ** 6768 * transcription direction: ** POSITIVE * left end position: ** 1597 * centisome position: ** 13.08587...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.2.1.39-RXN 3.2.1.39-RXN] ==
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== Gene Tiso_gene_6458 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 6768
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.2.1.39 EC-3.2.1.39]
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** POSITIVE
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* left end position:
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** 1597
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* centisome position:
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** 13.085874   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.7.7.11-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[1-3-beta-D-Glucans]][c] '''=>''' 1 [[1-3-beta-D-Glucans]][c] '''+''' 1 [[Glucopyranose]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 a 1,3-β-D-glucan[c] '''=>''' 1 a 1,3-β-D-glucan[c] '''+''' 1 D-glucopyranose[c]
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* Reaction: [[2.7.7.44-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[GLUC1PURIDYLTRANS-RXN]]
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* Gene: [[Tiso_gene_2599]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-esiliculosus]]
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*** Assignment: ec-number
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* Gene: [[Tiso_gene_8689]]
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* Reaction: [[NAG1P-URIDYLTRANS-RXN]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* Gene: [[Tiso_gene_16519]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[UTPHEXPURIDYLYLTRANS-RXN]]
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== Pathways  ==
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* Category: [[orthology]]
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== Pathways associated ==
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** Source: [[orthology-esiliculosus]]
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* [[UDPNACETYLGALSYN-PWY]]
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*** Tool: [[pantograph]]
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* [[PWY-7238]]
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* [[PWY0-1261]]
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* [[UDPNAGSYN-PWY]]
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* [[PWY-7343]]
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* [[PWY-3801]]
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* [[PWY-3821]]
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* [[PWY-7817]]
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* [[PWY-5514]]
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* [[PWY-6527]]
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* [[PWY-4841]]
 
== External links  ==
 
== External links  ==
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* UNIPROT:
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{{#set: right end position=6768}}
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** [http://www.uniprot.org/uniprot/Q7M1Y3 Q7M1Y3]
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{{#set: transcription direction=POSITIVE}}
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** [http://www.uniprot.org/uniprot/P23546 P23546]
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{{#set: left end position=1597}}
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** [http://www.uniprot.org/uniprot/Q7M1Y2 Q7M1Y2]
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{{#set: centisome position=13.085874    }}
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** [http://www.uniprot.org/uniprot/P23547 P23547]
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{{#set: reaction associated=2.7.7.11-RXN|2.7.7.44-RXN|GLUC1PURIDYLTRANS-RXN|NAG1P-URIDYLTRANS-RXN|UTPHEXPURIDYLYLTRANS-RXN}}
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** [http://www.uniprot.org/uniprot/P27666 P27666]
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{{#set: pathway associated=UDPNACETYLGALSYN-PWY|PWY-7238|PWY0-1261|UDPNAGSYN-PWY|PWY-7343|PWY-3801|PWY-3821|PWY-7817|PWY-5514|PWY-6527|PWY-4841}}
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** [http://www.uniprot.org/uniprot/Q7M1Y5 Q7M1Y5]
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** [http://www.uniprot.org/uniprot/Q7M1Y4 Q7M1Y4]
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** [http://www.uniprot.org/uniprot/P34742 P34742]
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** [http://www.uniprot.org/uniprot/Q02437 Q02437]
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** [http://www.uniprot.org/uniprot/Q45095 Q45095]
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** [http://www.uniprot.org/uniprot/P33157 P33157]
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** [http://www.uniprot.org/uniprot/Q41181 Q41181]
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** [http://www.uniprot.org/uniprot/P15737 P15737]
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** [http://www.uniprot.org/uniprot/P23432 P23432]
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** [http://www.uniprot.org/uniprot/P23433 P23433]
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** [http://www.uniprot.org/uniprot/P36401 P36401]
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** [http://www.uniprot.org/uniprot/Q40753 Q40753]
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** [http://www.uniprot.org/uniprot/Q7M1V4 Q7M1V4]
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** [http://www.uniprot.org/uniprot/Q02126 Q02126]
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** [http://www.uniprot.org/uniprot/Q06773 Q06773]
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** [http://www.uniprot.org/uniprot/P52401 P52401]
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** [http://www.uniprot.org/uniprot/Q02438 Q02438]
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** [http://www.uniprot.org/uniprot/Q42944 Q42944]
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** [http://www.uniprot.org/uniprot/P52400 P52400]
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** [http://www.uniprot.org/uniprot/P52402 P52402]
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** [http://www.uniprot.org/uniprot/Q9R650 Q9R650]
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** [http://www.uniprot.org/uniprot/P52398 P52398]
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** [http://www.uniprot.org/uniprot/P52399 P52399]
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** [http://www.uniprot.org/uniprot/O50007 O50007]
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** [http://www.uniprot.org/uniprot/Q43851 Q43851]
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** [http://www.uniprot.org/uniprot/Q03467 Q03467]
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** [http://www.uniprot.org/uniprot/Q03773 Q03773]
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** [http://www.uniprot.org/uniprot/O82063 O82063]
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** [http://www.uniprot.org/uniprot/O23783 O23783]
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** [http://www.uniprot.org/uniprot/Q9M2M3 Q9M2M3]
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** [http://www.uniprot.org/uniprot/Q9M4A9 Q9M4A9]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.2.1.39}}
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{{#set: gene associated=Tiso_gene_2599|Tiso_gene_8689|Tiso_gene_16519}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 21:07, 21 March 2018

Gene Tiso_gene_6458

  • right end position:
    • 6768
  • transcription direction:
    • POSITIVE
  • left end position:
    • 1597
  • centisome position:
    • 13.085874
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6458&oldid=46054"