Difference between revisions of "Tiso gene 1365"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12750 RXN-12750] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-[(3aS,4S,5R,7aS)-5-hydrox...")
(Created page with "Category:Gene == Gene Tiso_gene_1365 == * right end position: ** 8852 * transcription direction: ** POSITIVE * left end position: ** 6843 * centisome position: ** 28.45795...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12750 RXN-12750] ==
+
== Gene Tiso_gene_1365 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 8852
−
* common name:
+
* transcription direction:
−
** 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoate dehydrogenase
+
** POSITIVE
−
** 3-hydroxyacyl-_dehydrogenase
+
* left end position:
−
** hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit
+
** 6843
−
** hydroxyacyl-coenzyme_a_mitochondrial
+
* centisome position:
−
* ec number:
+
** 28.457954   
−
** [http://enzyme.expasy.org/EC/1.1.1.35 EC-1.1.1.35]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[ATPSYN-RXN]]
−
** 1 [[CPD-13757]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CPD-13758]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoyl-CoA[c] '''+''' 1 NAD+[c] '''=>''' 1 3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-oxopropanoyl-CoA[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: ec-number
−
== Genes associated with this reaction  ==
+
== Pathways associated ==
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[PWY-7219]]
−
* [[Tiso_gene_18839]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_14026]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14262]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_18838]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_5857]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_14027]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
== Pathways ==
+
−
* [[PWY-6944]], androstenedione degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6944 PWY-6944]
+
−
** '''2''' reactions found over '''15''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=8852}}
−
{{#set: common name=3-[(3aS,4S,5R,7aS)-5-hydroxy-7a-methyl-1-oxo-octahydro-1H-inden-4-yl]-3-hydroxypropanoate dehydrogenase}}
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: common name=3-hydroxyacyl-_dehydrogenase}}
+
{{#set: left end position=6843}}
−
{{#set: common name=hydroxyacyl-coenzyme_a_dehydrogenase_3-ketoacyl-coenzyme_a_thiolase_enoyl-coenzyme_a_hydratasealpha_subunit}}
+
{{#set: centisome position=28.457954    }}
−
{{#set: common name=hydroxyacyl-coenzyme_a_mitochondrial}}
+
{{#set: reaction associated=ATPSYN-RXN}}
−
{{#set: ec number=EC-1.1.1.35}}
+
{{#set: pathway associated=PWY-7219}}
−
{{#set: gene associated=Tiso_gene_18839|Tiso_gene_14026|Tiso_gene_14262|Tiso_gene_18838|Tiso_gene_5857|Tiso_gene_14027}}
+
−
{{#set: in pathway=PWY-6944}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 20:07, 21 March 2018

Gene Tiso_gene_1365

  • right end position:
    • 8852
  • transcription direction:
    • POSITIVE
  • left end position:
    • 6843
  • centisome position:
    • 28.457954
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1365&oldid=46099"