Difference between revisions of "Tiso gene 9243"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-PEROXIDASE-RXN GLUTATHIONE-PEROXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(Created page with "Category:Gene == Gene Tiso_gene_9243 == * right end position: ** 9449 * transcription direction: ** NEGATIVE * left end position: ** 3735 * centisome position: ** 39.35307...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-PEROXIDASE-RXN GLUTATHIONE-PEROXIDASE-RXN] ==
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== Gene Tiso_gene_9243 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 9449
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* common name:
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* transcription direction:
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** glutathione_peroxidase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.11.1.9 EC-1.11.1.9]
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** 3735
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* centisome position:
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** 39.353073   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ATPASE-RXN]]
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** 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 2 [[GLUTATHIONE]][c] '''=>''' 1 [[OXIDIZED-GLUTATHIONE]][c] '''+''' 2 [[WATER]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 hydrogen peroxide[c] '''+''' 2 glutathione[c] '''=>''' 1 glutathione disulfide[c] '''+''' 2 H2O[c]
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* Reaction: [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12195]]
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* [[Tiso_gene_1377]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-12196]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-in-silico_annotation]]
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***EC-NUMBER
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*** Assignment: ec-number
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** [[pantograph]]-[[esiliculosus]]
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* Reaction: [[RXN0-5462]]
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* [[Tiso_gene_6680]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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== Pathways associated ==
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** [[pantograph]]-[[synechocystis]]
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* [[PWY-7184]]
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** [[pantograph]]-[[esiliculosus]]
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* [[PWY-7198]]
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* [[Tiso_gene_8644]]
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* [[PWY-6545]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-7210]]
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***EC-NUMBER
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_6679]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-4081]], glutathione-peroxide redox reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4081 PWY-4081]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=9449}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16833 16833]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=3735}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00274 R00274]
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{{#set: centisome position=39.353073    }}
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* UNIPROT:
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{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
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** [http://www.uniprot.org/uniprot/Q7M355 Q7M355]
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{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
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** [http://www.uniprot.org/uniprot/P18283 P18283]
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** [http://www.uniprot.org/uniprot/P46412 P46412]
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** [http://www.uniprot.org/uniprot/Q64625 Q64625]
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** [http://www.uniprot.org/uniprot/P0A0T5 P0A0T5]
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** [http://www.uniprot.org/uniprot/P0A0T4 P0A0T4]
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** [http://www.uniprot.org/uniprot/P22352 P22352]
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** [http://www.uniprot.org/uniprot/P23764 P23764]
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** [http://www.uniprot.org/uniprot/P37141 P37141]
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** [http://www.uniprot.org/uniprot/P00435 P00435]
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** [http://www.uniprot.org/uniprot/P07203 P07203]
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** [http://www.uniprot.org/uniprot/P11352 P11352]
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** [http://www.uniprot.org/uniprot/P04041 P04041]
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** [http://www.uniprot.org/uniprot/P11909 P11909]
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** [http://www.uniprot.org/uniprot/P30708 P30708]
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** [http://www.uniprot.org/uniprot/P67878 P67878]
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** [http://www.uniprot.org/uniprot/P28714 P28714]
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** [http://www.uniprot.org/uniprot/P30710 P30710]
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** [http://www.uniprot.org/uniprot/Q06652 Q06652]
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** [http://www.uniprot.org/uniprot/P38143 P38143]
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** [http://www.uniprot.org/uniprot/P40581 P40581]
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** [http://www.uniprot.org/uniprot/Q38703 Q38703]
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** [http://www.uniprot.org/uniprot/P35666 P35666]
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** [http://www.uniprot.org/uniprot/P67877 P67877]
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** [http://www.uniprot.org/uniprot/Q7M448 Q7M448]
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** [http://www.uniprot.org/uniprot/P73824 P73824]
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** [http://www.uniprot.org/uniprot/Q9SZ54 Q9SZ54]
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** [http://www.uniprot.org/uniprot/O24296 O24296]
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** [http://www.uniprot.org/uniprot/O24032 O24032]
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** [http://www.uniprot.org/uniprot/O22448 O22448]
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** [http://www.uniprot.org/uniprot/O23968 O23968]
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** [http://www.uniprot.org/uniprot/O23970 O23970]
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** [http://www.uniprot.org/uniprot/Q98234 Q98234]
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** [http://www.uniprot.org/uniprot/O59858 O59858]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=glutathione_peroxidase}}
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{{#set: ec number=EC-1.11.1.9}}
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{{#set: gene associated=Tiso_gene_1377|Tiso_gene_6680|Tiso_gene_8644|Tiso_gene_6679}}
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{{#set: in pathway=DETOX1-PWY-1|PWY-4081}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 21:07, 21 March 2018

Gene Tiso_gene_9243

  • right end position:
    • 9449
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 3735
  • centisome position:
    • 39.353073
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_9243&oldid=46107"