Difference between revisions of "GLUTATHIONE-PEROXIDASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYMIDYLATESYN-RXN THYMIDYLATESYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidyla...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-PEROXIDASE-RXN GLUTATHIONE-PEROXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THYMIDYLATESYN-RXN THYMIDYLATESYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTATHIONE-PEROXIDASE-RXN GLUTATHIONE-PEROXIDASE-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** thymidylate_synthase
+
** glutathione_peroxidase
−
** ORF
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.45 EC-2.1.1.45]
+
** [http://enzyme.expasy.org/EC/1.11.1.9 EC-1.11.1.9]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[DUMP]][c] '''+''' 1 [[METHYLENE-THF-GLU-N]][c] '''=>''' 1 [[DIHYDROFOLATE-GLU-N]][c] '''+''' 1 [[TMP]][c]
+
** 2 [[GLUTATHIONE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[OXIDIZED-GLUTATHIONE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 dUMP[c] '''+''' 1 a 5,10-methylene-tetrahydrofolate[c] '''=>''' 1 a 7,8-dihydrofolate[c] '''+''' 1 dTMP[c]
+
** 2 glutathione[c] '''+''' 1 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 1 glutathione disulfide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_7708]]
+
* Gene: [[Tiso_gene_6679]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_18478]]
+
* Gene: [[Tiso_gene_8644]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_1377]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_6680]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-synechocystis]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7210]], pyrimidine deoxyribonucleotides biosynthesis from CTP: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7210 PWY-7210]
+
* [[DETOX1-PWY-1]], reactive oxygen species degradation: [http://metacyc.org/META/NEW-IMAGE?object=DETOX1-PWY-1 DETOX1-PWY-1]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7198]], pyrimidine deoxyribonucleotides de novo biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7198 PWY-7198]
+
* [[PWY-4081]], glutathione-peroxide redox reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4081 PWY-4081]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7199]], pyrimidine deoxyribonucleosides salvage: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7199 PWY-7199]
+
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
+
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7187]], pyrimidine deoxyribonucleotides de novo biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7187 PWY-7187]
+
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
−
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
+
−
** '''12''' reactions found over '''17''' reactions in the full pathway
+
−
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[manual]]:
+
* Category: [[orthology]]
−
** [[primary_network]]
+
** Source: [[orthology-synechocystis]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12104 12104]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16833 16833]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02101 R02101]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00274 R00274]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P19368 P19368]
+
** [http://www.uniprot.org/uniprot/Q7M355 Q7M355]
−
** [http://www.uniprot.org/uniprot/Q07422 Q07422]
+
** [http://www.uniprot.org/uniprot/P18283 P18283]
−
** [http://www.uniprot.org/uniprot/P47469 P47469]
+
** [http://www.uniprot.org/uniprot/P46412 P46412]
−
** [http://www.uniprot.org/uniprot/Q9JT57 Q9JT57]
+
** [http://www.uniprot.org/uniprot/Q64625 Q64625]
−
** [http://www.uniprot.org/uniprot/P42326 P42326]
+
** [http://www.uniprot.org/uniprot/P0A0T5 P0A0T5]
−
** [http://www.uniprot.org/uniprot/O02604 O02604]
+
** [http://www.uniprot.org/uniprot/P0A0T4 P0A0T4]
−
** [http://www.uniprot.org/uniprot/P07382 P07382]
+
** [http://www.uniprot.org/uniprot/P22352 P22352]
−
** [http://www.uniprot.org/uniprot/P16126 P16126]
+
** [http://www.uniprot.org/uniprot/P23764 P23764]
−
** [http://www.uniprot.org/uniprot/P13922 P13922]
+
** [http://www.uniprot.org/uniprot/P37141 P37141]
−
** [http://www.uniprot.org/uniprot/P20712 P20712]
+
** [http://www.uniprot.org/uniprot/P00435 P00435]
−
** [http://www.uniprot.org/uniprot/P11044 P11044]
+
** [http://www.uniprot.org/uniprot/P07203 P07203]
−
** [http://www.uniprot.org/uniprot/P45350 P45350]
+
** [http://www.uniprot.org/uniprot/P11352 P11352]
−
** [http://www.uniprot.org/uniprot/P45352 P45352]
+
** [http://www.uniprot.org/uniprot/P04041 P04041]
−
** [http://www.uniprot.org/uniprot/P51820 P51820]
+
** [http://www.uniprot.org/uniprot/P11909 P11909]
−
** [http://www.uniprot.org/uniprot/P0C0M4 P0C0M4]
+
** [http://www.uniprot.org/uniprot/P30708 P30708]
−
** [http://www.uniprot.org/uniprot/Q27828 Q27828]
+
** [http://www.uniprot.org/uniprot/P67878 P67878]
−
** [http://www.uniprot.org/uniprot/P09249 P09249]
+
** [http://www.uniprot.org/uniprot/P28714 P28714]
−
** [http://www.uniprot.org/uniprot/P12462 P12462]
+
** [http://www.uniprot.org/uniprot/P30710 P30710]
−
** [http://www.uniprot.org/uniprot/P07606 P07606]
+
** [http://www.uniprot.org/uniprot/Q06652 Q06652]
−
** [http://www.uniprot.org/uniprot/P00471 P00471]
+
** [http://www.uniprot.org/uniprot/P38143 P38143]
−
** [http://www.uniprot.org/uniprot/P0A884 P0A884]
+
** [http://www.uniprot.org/uniprot/P40581 P40581]
−
** [http://www.uniprot.org/uniprot/P00469 P00469]
+
** [http://www.uniprot.org/uniprot/Q38703 Q38703]
−
** [http://www.uniprot.org/uniprot/O81395 O81395]
+
** [http://www.uniprot.org/uniprot/P35666 P35666]
−
** [http://www.uniprot.org/uniprot/Q05763 Q05763]
+
** [http://www.uniprot.org/uniprot/P67877 P67877]
−
** [http://www.uniprot.org/uniprot/Q39687 Q39687]
+
** [http://www.uniprot.org/uniprot/Q7M448 Q7M448]
−
** [http://www.uniprot.org/uniprot/Q9YTJ6 Q9YTJ6]
+
** [http://www.uniprot.org/uniprot/P73824 P73824]
−
** [http://www.uniprot.org/uniprot/P06785 P06785]
+
** [http://www.uniprot.org/uniprot/Q9SZ54 Q9SZ54]
−
** [http://www.uniprot.org/uniprot/P04818 P04818]
+
** [http://www.uniprot.org/uniprot/O24296 O24296]
−
** [http://www.uniprot.org/uniprot/P07607 P07607]
+
** [http://www.uniprot.org/uniprot/O24032 O24032]
−
** [http://www.uniprot.org/uniprot/P13100 P13100]
+
** [http://www.uniprot.org/uniprot/O22448 O22448]
 +
** [http://www.uniprot.org/uniprot/O23968 O23968]
 +
** [http://www.uniprot.org/uniprot/O23970 O23970]
 +
** [http://www.uniprot.org/uniprot/Q98234 Q98234]
 +
** [http://www.uniprot.org/uniprot/O59858 O59858]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=thymidylate_synthase}}
+
{{#set: common name=glutathione_peroxidase}}
−
{{#set: common name=ORF}}
+
{{#set: ec number=EC-1.11.1.9}}
−
{{#set: ec number=EC-2.1.1.45}}
+
{{#set: gene associated=Tiso_gene_6679|Tiso_gene_8644|Tiso_gene_1377|Tiso_gene_6680}}
−
{{#set: gene associated=Tiso_gene_7708|Tiso_gene_18478}}
+
{{#set: in pathway=DETOX1-PWY-1|PWY-4081}}
−
{{#set: in pathway=PWY-7210|PWY-7198|PWY-7199|PWY-3841|PWY-7184|PWY-7187|PWY0-166|1CMET2-PWY}}
+
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-synechocystis|orthology-esiliculosus}}
−
{{#set: reconstruction source=primary_network}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 20:07, 21 March 2018

Reaction GLUTATHIONE-PEROXIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • glutathione_peroxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • DETOX1-PWY-1, reactive oxygen species degradation: DETOX1-PWY-1
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-4081, glutathione-peroxide redox reactions: PWY-4081
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





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