Difference between revisions of "Tiso gene 7386"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.2.14-RXN 3.1.2.14-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
(Created page with "Category:Gene == Gene Tiso_gene_7386 == * right end position: ** 5875 * transcription direction: ** NEGATIVE * left end position: ** 595 * centisome position: ** 5.2978363...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.2.14-RXN 3.1.2.14-RXN] ==
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== Gene Tiso_gene_7386 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5875
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.1.2.14 EC-3.1.2.14]
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** NEGATIVE
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* left end position:
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** 595
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* centisome position:
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** 5.2978363   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[Oleoyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[OLEATE-CPD]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 an oleoyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 H+[c] '''+''' 1 oleate[c]
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* Reaction: [[PHOSPHATIDATE-PHOSPHATASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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== Pathways  ==
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* Reaction: [[RXN-16030]]
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* [[PWY-5147]], oleate biosynthesis I (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5147 PWY-5147]
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** Source: [[annotation-in-silico_annotation]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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*** Assignment: ec-number
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== Reconstruction information  ==
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* Reaction: [[RXN-16121]]
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* Category: [[gap-filling]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** Assignment: ec-number
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*** Tool: [[meneco]]
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* Reaction: [[RXN-17730]]
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**** Comment: [[added for gapfilling]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY-7782]]
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* [[TRIGLSYN-PWY]]
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* [[PWY-6453]]
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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{{#set: right end position=5875}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02814 R02814]
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{{#set: transcription direction=NEGATIVE}}
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* UNIPROT:
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{{#set: left end position=595}}
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** [http://www.uniprot.org/uniprot/P08635 P08635]
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{{#set: centisome position=5.2978363    }}
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** [http://www.uniprot.org/uniprot/Q41635 Q41635]
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{{#set: reaction associated=PEPTIDYLPROLYL-ISOMERASE-RXN|PHOSPHATIDATE-PHOSPHATASE-RXN|RXN-16030|RXN-16121|RXN-17730}}
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** [http://www.uniprot.org/uniprot/P49327 P49327]
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{{#set: pathway associated=PWY-7782|TRIGLSYN-PWY|PWY-6453}}
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** [http://www.uniprot.org/uniprot/Q42558 Q42558]
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** [http://www.uniprot.org/uniprot/P00633 P00633]
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** [http://www.uniprot.org/uniprot/P19829 P19829]
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** [http://www.uniprot.org/uniprot/Q43745 Q43745]
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** [http://www.uniprot.org/uniprot/Q43718 Q43718]
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** [http://www.uniprot.org/uniprot/Q42561 Q42561]
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** [http://www.uniprot.org/uniprot/O49947 O49947]
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** [http://www.uniprot.org/uniprot/Q9SV64 Q9SV64]
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** [http://www.uniprot.org/uniprot/O48568 O48568]
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** [http://www.uniprot.org/uniprot/Q39402 Q39402]
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** [http://www.uniprot.org/uniprot/P12276 P12276]
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** [http://www.uniprot.org/uniprot/P12785 P12785]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-3.1.2.14}}
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{{#set: in pathway=PWY-5147}}
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{{#set: reconstruction category=gap-filling}}
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{{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium}}
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{{#set: reconstruction tool=meneco}}
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{{#set: reconstruction comment=added for gapfilling}}
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Latest revision as of 20:07, 21 March 2018

Gene Tiso_gene_7386

  • right end position:
    • 5875
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 595
  • centisome position:
    • 5.2978363
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_7386&oldid=46134"