Difference between revisions of "CPD-11592"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.e...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11592 CPD-11592] == * smiles: ** CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-]...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHEAMINOTRANS-RXN PHEAMINOTRANS-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11592 CPD-11592] ==
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* direction:
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* smiles:
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** REVERSIBLE
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** CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(SC)N=3))
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
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** 2-methylthio-N6-dimethylallyladenosine37 in tRNA
 
* Synonym(s):
 
* Synonym(s):
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** tRNA-(2-methylthio-N6-dimethylallyladenosine37)
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** a tRNA containing 2-methylthio-N6-dimethylallyladenosine37
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GLT]][c] '''+''' 1 [[PHENYL-PYRUVATE]][c] '''<=>''' 1 [[PHE]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
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* [[RXN-14481]]
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* With common name(s):
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* [[RXN0-5063]]
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** 1 L-glutamate[c] '''+''' 1 2-oxo-3-phenylpropanoate[c] '''<=>''' 1 L-phenylalanine[c] '''+''' 1 2-oxoglutarate[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_6815]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_17809]]
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** [[pantograph]]-[[athaliana]]
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* [[Tiso_gene_15680]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13892]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_13538]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_10680]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[synechocystis]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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** [[pantograph]]-[[creinhardtii]]
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* [[Tiso_gene_17718]]
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** [[pantograph]]-[[athaliana]]
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** [[pantograph]]-[[esiliculosus]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[ANAPHENOXI-PWY]], L-phenylalanine degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=ANAPHENOXI-PWY ANAPHENOXI-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7432]], L-phenylalanine biosynthesis III (cytosolic, plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7432 PWY-7432]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5079]], L-phenylalanine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5079 PWY-5079]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PHESYN]], L-phenylalanine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PHESYN PHESYN]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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*** [[synechocystis]]
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*** [[athaliana]]
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*** [[esiliculosus]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CHEBI:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25152 25152]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=74417 74417]
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* LIGAND-RXN:
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{{#set: smiles=CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(SC)N=3))}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00694 R00694]
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{{#set: common name=2-methylthio-N6-dimethylallyladenosine37 in tRNA}}
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* UNIPROT:
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{{#set: common name=tRNA-(2-methylthio-N6-dimethylallyladenosine37)|a tRNA containing 2-methylthio-N6-dimethylallyladenosine37}}
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** [http://www.uniprot.org/uniprot/O84642 O84642]
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{{#set: produced by=RXN-14481|RXN0-5063}}
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** [http://www.uniprot.org/uniprot/Q02636 Q02636]
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** [http://www.uniprot.org/uniprot/Q9Z7G5 Q9Z7G5]
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** [http://www.uniprot.org/uniprot/Q9V0L2 Q9V0L2]
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** [http://www.uniprot.org/uniprot/Q9PHA8 Q9PHA8]
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** [http://www.uniprot.org/uniprot/O59096 O59096]
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** [http://www.uniprot.org/uniprot/O58489 O58489]
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** [http://www.uniprot.org/uniprot/Q9UZ63 Q9UZ63]
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** [http://www.uniprot.org/uniprot/Q9JT83 Q9JT83]
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** [http://www.uniprot.org/uniprot/Q9JYA1 Q9JYA1]
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** [http://www.uniprot.org/uniprot/P95468 P95468]
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** [http://www.uniprot.org/uniprot/Q9UWK9 Q9UWK9]
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** [http://www.uniprot.org/uniprot/Q9UWK8 Q9UWK8]
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** [http://www.uniprot.org/uniprot/P74861 P74861]
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** [http://www.uniprot.org/uniprot/P04693 P04693]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.6.1.57}}
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{{#set: gene associated=Tiso_gene_6815|Tiso_gene_17809|Tiso_gene_15680|Tiso_gene_13892|Tiso_gene_13538|Tiso_gene_10680|Tiso_gene_17718}}
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{{#set: in pathway=ANAPHENOXI-PWY|PWY-7432|PWY-5079|PHESYN}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii|synechocystis|athaliana|esiliculosus}}
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Latest revision as of 21:07, 21 March 2018

Metabolite CPD-11592

  • smiles:
    • CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(SC)N=3))
  • common name:
    • 2-methylthio-N6-dimethylallyladenosine37 in tRNA
  • Synonym(s):
    • tRNA-(2-methylthio-N6-dimethylallyladenosine37)
    • a tRNA containing 2-methylthio-N6-dimethylallyladenosine37

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)=CCNC3(C2(N=CN(C1(OC(COP(=O)([O-])O[a tRNA])C(OP([O-])(=O)O[a tRNA])C(O)1))C=2N=C(SC)N=3))" cannot be used as a page name in this wiki.


Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=CPD-11592&oldid=46138"