Difference between revisions of "RXN-16616"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLATECYC-RXN ADENYLATECYC-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** adenylate_cyc...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16616 RXN-16616] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-carrier-pro...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYLATECYC-RXN ADENYLATECYC-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16616 RXN-16616] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** adenylate_cyclase
+
** 3-oxoacyl-(acyl-carrier-protein)
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.6.1.1 EC-4.6.1.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[CAMP]][c]
+
** 1 [[5Z-3-oxo-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3R-5Z-3-hydroxy-tetradec-5-enoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 cyclic-AMP[c]
+
** 1 a (5Z)-3-oxo-tetradec-5-enoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a (3R,5Z)-3-hydroxy-tetradec-5-enoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_9251]]
+
* Gene: [[Tiso_gene_9885]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_6871]]
+
* Gene: [[Tiso_gene_13083]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: EC-NUMBER
−
* [[Tiso_gene_9865]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: EC-NUMBER
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_14301]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_5483]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_6404]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_15744]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_1107]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_34]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_10495]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_16143]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_8950]]
+
−
** [[pantograph]]-[[creinhardtii]]
+
−
* [[Tiso_gene_17342]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16542]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16294]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_16074]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_10744]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_13108]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
 
== Pathways  ==
 
== Pathways  ==
 +
* [[PWY-7664]], oleate biosynthesis IV (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7664 PWY-7664]
 +
** '''10''' reactions found over '''14''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
* [[annotation]]:
+
*** Tool: [[pathwaytools]]
−
** [[pathwaytools]]:
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15389 15389]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00089 R00089]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P14605 P14605]
 
−
** [http://www.uniprot.org/uniprot/Q05766 Q05766]
 
−
** [http://www.uniprot.org/uniprot/P21932 P21932]
 
−
** [http://www.uniprot.org/uniprot/P19754 P19754]
 
−
** [http://www.uniprot.org/uniprot/P26769 P26769]
 
−
** [http://www.uniprot.org/uniprot/P26770 P26770]
 
−
** [http://www.uniprot.org/uniprot/Q03343 Q03343]
 
−
** [http://www.uniprot.org/uniprot/Q01341 Q01341]
 
−
** [http://www.uniprot.org/uniprot/P40134 P40134]
 
−
** [http://www.uniprot.org/uniprot/P40146 P40146]
 
−
** [http://www.uniprot.org/uniprot/P51829 P51829]
 
−
** [http://www.uniprot.org/uniprot/P49606 P49606]
 
−
** [http://www.uniprot.org/uniprot/P0A1A7 P0A1A7]
 
−
** [http://www.uniprot.org/uniprot/P19485 P19485]
 
−
** [http://www.uniprot.org/uniprot/Q03100 Q03100]
 
−
** [http://www.uniprot.org/uniprot/P32870 P32870]
 
−
** [http://www.uniprot.org/uniprot/Q08462 Q08462]
 
−
** [http://www.uniprot.org/uniprot/P43524 P43524]
 
−
** [http://www.uniprot.org/uniprot/Q44561 Q44561]
 
−
** [http://www.uniprot.org/uniprot/P51830 P51830]
 
−
** [http://www.uniprot.org/uniprot/Q01513 Q01513]
 
−
** [http://www.uniprot.org/uniprot/P40136 P40136]
 
−
** [http://www.uniprot.org/uniprot/P15318 P15318]
 
−
** [http://www.uniprot.org/uniprot/P08678 P08678]
 
−
** [http://www.uniprot.org/uniprot/P23466 P23466]
 
−
** [http://www.uniprot.org/uniprot/P00936 P00936]
 
−
** [http://www.uniprot.org/uniprot/P27580 P27580]
 
−
** [http://www.uniprot.org/uniprot/P40145 P40145]
 
−
** [http://www.uniprot.org/uniprot/P26338 P26338]
 
−
** [http://www.uniprot.org/uniprot/P40130 P40130]
 
−
** [http://www.uniprot.org/uniprot/P30528 P30528]
 
−
** [http://www.uniprot.org/uniprot/Q9QW33 Q9QW33]
 
−
** [http://www.uniprot.org/uniprot/P72951 P72951]
 
−
** [http://www.uniprot.org/uniprot/P40138 P40138]
 
−
** [http://www.uniprot.org/uniprot/Q9VW60 Q9VW60]
 
−
** [http://www.uniprot.org/uniprot/O96306 O96306]
 
−
** [http://www.uniprot.org/uniprot/Q9Z286 Q9Z286]
 
−
** [http://www.uniprot.org/uniprot/O76229 O76229]
 
−
** [http://www.uniprot.org/uniprot/O77079 O77079]
 
−
** [http://www.uniprot.org/uniprot/O96762 O96762]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=adenylate_cyclase}}
+
{{#set: common name=3-oxoacyl-(acyl-carrier-protein)}}
−
{{#set: ec number=EC-4.6.1.1}}
+
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: gene associated=Tiso_gene_9251|Tiso_gene_6871|Tiso_gene_9865|Tiso_gene_14301|Tiso_gene_5483|Tiso_gene_6404|Tiso_gene_15744|Tiso_gene_1107|Tiso_gene_34|Tiso_gene_10495|Tiso_gene_16143|Tiso_gene_8950|Tiso_gene_17342|Tiso_gene_16542|Tiso_gene_16294|Tiso_gene_16074|Tiso_gene_10744|Tiso_gene_13108}}
+
{{#set: gene associated=Tiso_gene_9885|Tiso_gene_13083}}
−
{{#set: in pathway=}}
+
{{#set: in pathway=PWY-7664}}
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|esiliculosus}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=in-silico_annotation}}
 

Latest revision as of 21:08, 21 March 2018

Reaction RXN-16616

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-(acyl-carrier-protein)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7664, oleate biosynthesis IV (anaerobic): PWY-7664
    • 10 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16616&oldid=46183"