Difference between revisions of "RXN1G-368"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7665 RXN-7665] == * direction: ** LEFT-TO-RIGHT * common name: ** geranylgeranyl_diphosphate_re...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-368 RXN1G-368] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...") |
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[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object= | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-368 RXN1G-368] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** 3-oxoacyl-synthase |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41] | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[Stearoyl-ACPs]][c] '''=>''' 1 [[3-oxo-arachidoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 a stearoyl-[acp][c] '''=>''' 1 a 3-oxo-arachidoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[Tiso_gene_19302]] |
| − | ** | + | ** Source: [[orthology-esiliculosus]] |
| − | *** | + | * Gene: [[Tiso_gene_5939]] |
| − | ** | + | ** Source: [[annotation-in-silico_annotation]] |
| − | *** | + | *** Assignment: EC-NUMBER |
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[Tiso_gene_14485]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | * Gene: [[Tiso_gene_15991]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321] |
| − | ** ''' | + | ** '''86''' reactions found over '''182''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[ | + | * Category: [[orthology]] |
| − | ** [[ | + | ** Source: [[orthology-esiliculosus]] |
| − | *** [[experimental_annotation]] | + | *** Tool: [[pantograph]] |
| − | *** [[in-silico_annotation]] | + | * Category: [[manual]] |
| + | ** Source: [[manual-primary_network]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=3-oxoacyl-synthase}} |
| − | {{#set: gene associated= | + | {{#set: ec number=EC-2.3.1.41}} |
| − | {{#set: in pathway= | + | {{#set: gene associated=Tiso_gene_19302|Tiso_gene_5939|Tiso_gene_14485|Tiso_gene_15991}} |
| − | {{#set: reconstruction category=annotation}} | + | {{#set: in pathway=PWYG-321}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction category=orthology|manual|annotation}} |
| − | {{#set: reconstruction | + | {{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}} |
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 21:08, 21 March 2018
Contents
Reaction RXN1G-368
- direction:
- LEFT-TO-RIGHT
- common name:
- 3-oxoacyl-synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 MALONYL-COA[c] + 1 Stearoyl-ACPs[c] => 1 3-oxo-arachidoyl-ACPs[c] + 1 CARBON-DIOXIDE[c] + 1 CO-A[c]
- With common name(s):
- 1 H+[c] + 1 malonyl-CoA[c] + 1 a stearoyl-[acp][c] => 1 a 3-oxo-arachidoyl-[acp][c] + 1 CO2[c] + 1 coenzyme A[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_19302
- Source: orthology-esiliculosus
- Gene: Tiso_gene_5939
- Source: annotation-in-silico_annotation
- Assignment: EC-NUMBER
- Source: annotation-experimental_annotation
- Assignment: EC-NUMBER
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_14485
- Source: orthology-esiliculosus
- Gene: Tiso_gene_15991
- Source: orthology-esiliculosus
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: manual
- Source: manual-primary_network
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
