Difference between revisions of "RXN1G-368"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-A2-RXN PHOSPHOLIPASE-A2-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-368 RXN1G-368] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-synthase * ec num...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHOLIPASE-A2-RXN PHOSPHOLIPASE-A2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1G-368 RXN1G-368] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** ORF
+
** 3-oxoacyl-synthase
−
** abhydrolase_domain-containing_protein_4-like
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.1.4 EC-3.1.1.4]
+
** [http://enzyme.expasy.org/EC/2.3.1.41 EC-2.3.1.41]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[PHOSPHATIDYLCHOLINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Long-Chain-Fatty-Acids]][c] '''+''' 1 [[2-Lysophosphatidylcholines]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-COA]][c] '''+''' 1 [[Stearoyl-ACPs]][c] '''=>''' 1 [[3-oxo-arachidoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 a phosphatidylcholine[c] '''=>''' 1 H+[c] '''+''' 1 a long-chain fatty acid[c] '''+''' 1 a 1-acyl-sn-glycero-3-phosphocholine[c]
+
** 1 H+[c] '''+''' 1 malonyl-CoA[c] '''+''' 1 a stearoyl-[acp][c] '''=>''' 1 a 3-oxo-arachidoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[Tiso_gene_15047]]
+
* Gene: [[Tiso_gene_19302]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_5939]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[Tiso_gene_12960]]
+
** Source: [[annotation-experimental_annotation]]
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_15046]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[Tiso_gene_12959]]
+
−
** Source: [[annotation-in-silico_annotation]]
+
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14485]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15991]]
 +
** Source: [[orthology-esiliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6803]], phosphatidylcholine acyl editing: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6803 PWY-6803]
+
* [[PWYG-321]], mycolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWYG-321 PWYG-321]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''86''' reactions found over '''182''' reactions in the full pathway
−
* [[LIPASYN-PWY]], phospholipases: [http://metacyc.org/META/NEW-IMAGE?object=LIPASYN-PWY LIPASYN-PWY]
+
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15801 15801]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01313 R01313]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P04362 P04362]
 
−
** [http://www.uniprot.org/uniprot/Q7M335 Q7M335]
 
−
** [http://www.uniprot.org/uniprot/P14424 P14424]
 
−
** [http://www.uniprot.org/uniprot/P14418 P14418]
 
−
** [http://www.uniprot.org/uniprot/P19000 P19000]
 
−
** [http://www.uniprot.org/uniprot/Q7M3E5 Q7M3E5]
 
−
** [http://www.uniprot.org/uniprot/P14420 P14420]
 
−
** [http://www.uniprot.org/uniprot/P20258 P20258]
 
−
** [http://www.uniprot.org/uniprot/P14423 P14423]
 
−
** [http://www.uniprot.org/uniprot/Q7LZG4 Q7LZG4]
 
−
** [http://www.uniprot.org/uniprot/P20250 P20250]
 
−
** [http://www.uniprot.org/uniprot/P21790 P21790]
 
−
** [http://www.uniprot.org/uniprot/P21789 P21789]
 
−
** [http://www.uniprot.org/uniprot/P81480 P81480]
 
−
** [http://www.uniprot.org/uniprot/P47712 P47712]
 
−
** [http://www.uniprot.org/uniprot/P20476 P20476]
 
−
** [http://www.uniprot.org/uniprot/P24644 P24644]
 
−
** [http://www.uniprot.org/uniprot/P81478 P81478]
 
−
** [http://www.uniprot.org/uniprot/P06859 P06859]
 
−
** [http://www.uniprot.org/uniprot/P39877 P39877]
 
−
** [http://www.uniprot.org/uniprot/P48076 P48076]
 
−
** [http://www.uniprot.org/uniprot/Q7M442 Q7M442]
 
−
** [http://www.uniprot.org/uniprot/P18997 P18997]
 
−
** [http://www.uniprot.org/uniprot/P20259 P20259]
 
−
** [http://www.uniprot.org/uniprot/P20251 P20251]
 
−
** [http://www.uniprot.org/uniprot/P21791 P21791]
 
−
** [http://www.uniprot.org/uniprot/P81479 P81479]
 
−
** [http://www.uniprot.org/uniprot/P51972 P51972]
 
−
** [http://www.uniprot.org/uniprot/Q7M4I6 Q7M4I6]
 
−
** [http://www.uniprot.org/uniprot/Q7M4I5 Q7M4I5]
 
−
** [http://www.uniprot.org/uniprot/P14421 P14421]
 
−
** [http://www.uniprot.org/uniprot/P20260 P20260]
 
−
** [http://www.uniprot.org/uniprot/P20252 P20252]
 
−
** [http://www.uniprot.org/uniprot/P21792 P21792]
 
−
** [http://www.uniprot.org/uniprot/Q7LZQ5 Q7LZQ5]
 
−
** [http://www.uniprot.org/uniprot/P20253 P20253]
 
−
** [http://www.uniprot.org/uniprot/P20381 P20381]
 
−
** [http://www.uniprot.org/uniprot/Q7LZQ7 Q7LZQ7]
 
−
** [http://www.uniprot.org/uniprot/P20254 P20254]
 
−
** [http://www.uniprot.org/uniprot/P20255 P20255]
 
−
** [http://www.uniprot.org/uniprot/Q92147 Q92147]
 
−
** [http://www.uniprot.org/uniprot/P20256 P20256]
 
−
** [http://www.uniprot.org/uniprot/P20257 P20257]
 
−
** [http://www.uniprot.org/uniprot/P47711 P47711]
 
−
** [http://www.uniprot.org/uniprot/P31482 P31482]
 
−
** [http://www.uniprot.org/uniprot/P62023 P62023]
 
−
** [http://www.uniprot.org/uniprot/P11407 P11407]
 
−
** [http://www.uniprot.org/uniprot/P18999 P18999]
 
−
** [http://www.uniprot.org/uniprot/O42187 O42187]
 
−
** [http://www.uniprot.org/uniprot/Q98996 Q98996]
 
−
** [http://www.uniprot.org/uniprot/Q9NP80 Q9NP80]
 
−
** [http://www.uniprot.org/uniprot/P14615 P14615]
 
−
** [http://www.uniprot.org/uniprot/P25498 P25498]
 
−
** [http://www.uniprot.org/uniprot/Q7M3V4 Q7M3V4]
 
−
** [http://www.uniprot.org/uniprot/Q7M334 Q7M334]
 
−
** [http://www.uniprot.org/uniprot/Q7M1V0 Q7M1V0]
 
−
** [http://www.uniprot.org/uniprot/P24606 P24606]
 
−
** [http://www.uniprot.org/uniprot/P04417 P04417]
 
−
** [http://www.uniprot.org/uniprot/P00621 P00621]
 
−
** [http://www.uniprot.org/uniprot/P00620 P00620]
 
−
** [http://www.uniprot.org/uniprot/P00622 P00622]
 
−
** [http://www.uniprot.org/uniprot/P00593 P00593]
 
−
** [http://www.uniprot.org/uniprot/P06596 P06596]
 
−
** [http://www.uniprot.org/uniprot/P00610 P00610]
 
−
** [http://www.uniprot.org/uniprot/P16354 P16354]
 
−
** [http://www.uniprot.org/uniprot/P00630 P00630]
 
−
** [http://www.uniprot.org/uniprot/P00594 P00594]
 
−
** [http://www.uniprot.org/uniprot/P04054 P04054]
 
−
** [http://www.uniprot.org/uniprot/P14555 P14555]
 
−
** [http://www.uniprot.org/uniprot/P00606 P00606]
 
−
** [http://www.uniprot.org/uniprot/P00618 P00618]
 
−
** [http://www.uniprot.org/uniprot/P17934 P17934]
 
−
** [http://www.uniprot.org/uniprot/P00627 P00627]
 
−
** [http://www.uniprot.org/uniprot/P00628 P00628]
 
−
** [http://www.uniprot.org/uniprot/P00629 P00629]
 
−
** [http://www.uniprot.org/uniprot/P00611 P00611]
 
−
** [http://www.uniprot.org/uniprot/P00612 P00612]
 
−
** [http://www.uniprot.org/uniprot/P00613 P00613]
 
−
** [http://www.uniprot.org/uniprot/P00602 P00602]
 
−
** [http://www.uniprot.org/uniprot/P00599 P00599]
 
−
** [http://www.uniprot.org/uniprot/P00603 P00603]
 
−
** [http://www.uniprot.org/uniprot/P00600 P00600]
 
−
** [http://www.uniprot.org/uniprot/P00604 P00604]
 
−
** [http://www.uniprot.org/uniprot/P00601 P00601]
 
−
** [http://www.uniprot.org/uniprot/P00598 P00598]
 
−
** [http://www.uniprot.org/uniprot/P00609 P00609]
 
−
** [http://www.uniprot.org/uniprot/P00608 P00608]
 
−
** [http://www.uniprot.org/uniprot/P00614 P00614]
 
−
** [http://www.uniprot.org/uniprot/P00616 P00616]
 
−
** [http://www.uniprot.org/uniprot/P00592 P00592]
 
−
** [http://www.uniprot.org/uniprot/P04416 P04416]
 
−
** [http://www.uniprot.org/uniprot/P00595 P00595]
 
−
** [http://www.uniprot.org/uniprot/P00623 P00623]
 
−
** [http://www.uniprot.org/uniprot/P00624 P00624]
 
−
** [http://www.uniprot.org/uniprot/P24027 P24027]
 
−
** [http://www.uniprot.org/uniprot/P62022 P62022]
 
−
** [http://www.uniprot.org/uniprot/P04055 P04055]
 
−
** [http://www.uniprot.org/uniprot/P04056 P04056]
 
−
** [http://www.uniprot.org/uniprot/P04057 P04057]
 
−
** [http://www.uniprot.org/uniprot/P00625 P00625]
 
−
** [http://www.uniprot.org/uniprot/P06860 P06860]
 
−
** [http://www.uniprot.org/uniprot/P00626 P00626]
 
−
** [http://www.uniprot.org/uniprot/P14422 P14422]
 
−
** [http://www.uniprot.org/uniprot/P07037 P07037]
 
−
** [http://www.uniprot.org/uniprot/P10116 P10116]
 
−
** [http://www.uniprot.org/uniprot/P08873 P08873]
 
−
** [http://www.uniprot.org/uniprot/P08872 P08872]
 
−
** [http://www.uniprot.org/uniprot/P14411 P14411]
 
−
** [http://www.uniprot.org/uniprot/P15445 P15445]
 
−
** [http://www.uniprot.org/uniprot/P20474 P20474]
 
−
** [http://www.uniprot.org/uniprot/P24605 P24605]
 
−
** [http://www.uniprot.org/uniprot/P22640 P22640]
 
−
** [http://www.uniprot.org/uniprot/P24293 P24293]
 
−
** [http://www.uniprot.org/uniprot/P24294 P24294]
 
−
** [http://www.uniprot.org/uniprot/P34180 P34180]
 
−
** [http://www.uniprot.org/uniprot/P80003 P80003]
 
−
** [http://www.uniprot.org/uniprot/P31854 P31854]
 
−
** [http://www.uniprot.org/uniprot/P43434 P43434]
 
−
** [http://www.uniprot.org/uniprot/Q7LZG3 Q7LZG3]
 
−
** [http://www.uniprot.org/uniprot/P43318 P43318]
 
−
** [http://www.uniprot.org/uniprot/Q90W39 Q90W39]
 
−
** [http://www.uniprot.org/uniprot/Q10754 Q10754]
 
−
** [http://www.uniprot.org/uniprot/Q10755 Q10755]
 
−
** [http://www.uniprot.org/uniprot/Q10756 Q10756]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=ORF}}
+
{{#set: common name=3-oxoacyl-synthase}}
−
{{#set: common name=abhydrolase_domain-containing_protein_4-like}}
+
{{#set: ec number=EC-2.3.1.41}}
−
{{#set: ec number=EC-3.1.1.4}}
+
{{#set: gene associated=Tiso_gene_19302|Tiso_gene_5939|Tiso_gene_14485|Tiso_gene_15991}}
−
{{#set: gene associated=Tiso_gene_15047|Tiso_gene_12960|Tiso_gene_15046|Tiso_gene_12959}}
+
{{#set: in pathway=PWYG-321}}
−
{{#set: in pathway=PWY-6803|LIPASYN-PWY}}
+
{{#set: reconstruction category=orthology|manual|annotation}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-esiliculosus}}
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
{{#set: reconstruction tool=pantograph|pathwaytools}}
−
{{#set: reconstruction tool=pathwaytools}}
+

Latest revision as of 20:08, 21 March 2018

Reaction RXN1G-368

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-oxoacyl-synthase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWYG-321, mycolate biosynthesis: PWYG-321
    • 86 reactions found over 182 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN1G-368&oldid=46201"