Difference between revisions of "Tiso gene 20384"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.123-RXN 2.4.1.123-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Gene == Gene Tiso_gene_20384 == * right end position: ** 1321 * transcription direction: ** POSITIVE * left end position: ** 24 * centisome position: ** 1.690141...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.123-RXN 2.4.1.123-RXN] ==
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== Gene Tiso_gene_20384 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1321
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.4.1.123 EC-2.4.1.123]
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** POSITIVE
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* left end position:
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** 24
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* centisome position:
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** 1.690141   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[M5TAP]]
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** 1 [[MYO-INOSITOL]][c] '''+''' 1 [[CPD-14553]][c] '''=>''' 1 [[UDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-458]][c]
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* With common name(s):
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** 1 myo-inositol[c] '''+''' 1 UDP-α-D-galactose[c] '''=>''' 1 UDP[c] '''+''' 1 H+[c] '''+''' 1 galactinol[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_18913]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-6524]], lychnose and isolychnose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6524 PWY-6524]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6525]], stellariose and mediose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6525 PWY-6525]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5337]], stachyose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5337 PWY-5337]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-creinhardtii]]
 
** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Reaction: [[URA-PHOSPH-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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* Reaction: [[URPHOS-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5532]]
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* [[PWY0-1295]]
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* [[PWY-7181]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1321}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12464 12464]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=24}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01192 R01192]
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{{#set: centisome position=1.690141    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=M5TAP|URA-PHOSPH-RXN|URPHOS-RXN}}
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{{#set: ec number=EC-2.4.1.123}}
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{{#set: pathway associated=PWY-5532|PWY0-1295|PWY-7181}}
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{{#set: gene associated=Tiso_gene_18913}}
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{{#set: in pathway=PWY-6524|PWY-6525|PWY-5337}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-creinhardtii}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:08, 21 March 2018

Gene Tiso_gene_20384

  • right end position:
    • 1321
  • transcription direction:
    • POSITIVE
  • left end position:
    • 24
  • centisome position:
    • 1.690141
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_20384&oldid=46226"