Difference between revisions of "RXN-5462"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_13724 == * Synonym(s): == Reactions associated == * Reaction: RXN-8443 ** Source: orthology-athaliana == Pathways associated == *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5462 RXN-5462] == * direction: ** LEFT-TO-RIGHT * common name: ** vacuolar_protein_sorting-asso...")
 
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_13724 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5462 RXN-5462] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 +
* common name:
 +
** vacuolar_protein_sorting-associated_protein_51_homolog
 +
** ORF
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/2.4.1.132 EC-2.4.1.132]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* Reaction: [[RXN-8443]]
+
* With identifiers:
−
** Source: [[orthology-athaliana]]
+
** 1 [[GDP-MANNOSE]][c] '''+''' 1 [[ALPHA-D-MANNOSYLCHITOBIO]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[GDP]][c] '''+''' 1 [[CPD-5161]][c]
−
== Pathways associated ==
+
* With common name(s):
−
* [[PWY-5381]]
+
** 1 GDP-α-D-mannose[c] '''+''' 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 H+[c] '''+''' 1 GDP[c] '''+''' 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_16872]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_10734]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways ==
 +
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
 +
** '''19''' reactions found over '''19''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: reaction associated=RXN-8443}}
+
* RHEA:
−
{{#set: pathway associated=PWY-5381}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29518 29518]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05973 R05973]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05002 R05002]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=vacuolar_protein_sorting-associated_protein_51_homolog}}
 +
{{#set: common name=ORF}}
 +
{{#set: ec number=EC-2.4.1.132}}
 +
{{#set: gene associated=Tiso_gene_16872|Tiso_gene_10734}}
 +
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 21:08, 21 March 2018

Reaction RXN-5462

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • vacuolar_protein_sorting-associated_protein_51_homolog
    • ORF
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GDP-α-D-mannose[c] + 1 β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] => 1 H+[c] + 1 GDP[c] + 1 α-D-Man-(1→3)-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-5462&oldid=46227"