Difference between revisions of "Tiso gene 1350"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8026 RXN-8026] == * direction: ** LEFT-TO-RIGHT * Synonym(s): ** CrtZ == Reaction Formula == *...")
 
(Created page with "Category:Gene == Gene Tiso_gene_1350 == * right end position: ** 35536 * transcription direction: ** NEGATIVE * left end position: ** 33614 * centisome position: ** 93.608...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8026 RXN-8026] ==
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== Gene Tiso_gene_1350 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 35536
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* transcription direction:
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** NEGATIVE
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* left end position:
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** 33614
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* centisome position:
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** 93.60884   
 
* Synonym(s):
 
* Synonym(s):
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** CrtZ
 
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[KDO-8PSYNTH-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-7409]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[CPD1F-130]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 oxygen[c] '''+''' 1 H+[c] '''+''' 1 β-cryptoxanthin[c] '''+''' 1 NADH[c] '''=>''' 1 H2O[c] '''+''' 1 NAD+[c] '''+''' 1 zeaxanthin[c]
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== Pathways associated ==
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* [[PWY-7674]]
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== Genes associated with this reaction  ==
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* [[PWY-1269]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[Tiso_gene_10837]]
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** [[pantograph]]-[[synechocystis]]
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== Pathways ==
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* [[PWY-5288]], astaxanthin biosynthesis (bacteria, fungi, algae): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5288 PWY-5288]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5944]], zeaxanthin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5944 PWY-5944]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7638]], echinenone and zeaxanthin biosynthesis (Synechocystis): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7638 PWY-7638]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[synechocystis]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=35536}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30330 30330]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=33614}}
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** [http://www.genome.jp/dbget-bin/www_bget?R07559 R07559]
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{{#set: centisome position=93.60884    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=KDO-8PSYNTH-RXN}}
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{{#set: common name=CrtZ}}
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{{#set: pathway associated=PWY-7674|PWY-1269}}
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{{#set: gene associated=Tiso_gene_10837}}
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{{#set: in pathway=PWY-5288|PWY-5944|PWY-7638}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=synechocystis}}
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Latest revision as of 20:08, 21 March 2018

Gene Tiso_gene_1350

  • right end position:
    • 35536
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 33614
  • centisome position:
    • 93.60884
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_1350&oldid=46238"