Difference between revisions of "Tiso gene 15401"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.7-RXN 1.5.1.7-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org...")
(Created page with "Category:Gene == Gene Tiso_gene_15401 == * right end position: ** 4995 * transcription direction: ** POSITIVE * left end position: ** 2888 * centisome position: ** 57.3357...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=1.5.1.7-RXN 1.5.1.7-RXN] ==
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== Gene Tiso_gene_15401 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 4995
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/1.5.1.7 EC-1.5.1.7]
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** POSITIVE
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* left end position:
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** 2888
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* centisome position:
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** 57.335716   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PPPGO]]
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** 1 [[SACCHAROPINE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[LYS]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[2-KETOGLUTARATE]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[PROTOPORGENOXI-RXN]]
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** 1 L-saccharopine[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 L-lysine[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 2-oxoglutarate[c]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_1156]]
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** Source: [[orthology-athaliana]]
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** [[pantograph]]-[[athaliana]]
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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== Pathways associated ==
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* [[LYSINE-AMINOAD-PWY]], L-lysine biosynthesis IV: [http://metacyc.org/META/NEW-IMAGE?object=LYSINE-AMINOAD-PWY LYSINE-AMINOAD-PWY]
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* [[PWY0-1415]]
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** '''3''' reactions found over '''9''' reactions in the full pathway
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* [[HEME-BIOSYNTHESIS-II]]
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== Reconstruction information  ==
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* [[CHLOROPHYLL-SYN]]
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* [[orthology]]:
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* [[PWY-7159]]
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** [[pantograph]]:
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*** [[athaliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=4995}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12440 12440]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=2888}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00715 R00715]
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{{#set: centisome position=57.335716    }}
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* UNIPROT:
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{{#set: reaction associated=PPPGO|PROTOPORGENOXI-RXN}}
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** [http://www.uniprot.org/uniprot/P38997 P38997]
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{{#set: pathway associated=PWY0-1415|HEME-BIOSYNTHESIS-II|CHLOROPHYLL-SYN|PWY-7159}}
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** [http://www.uniprot.org/uniprot/P38998 P38998]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-1.5.1.7}}
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{{#set: gene associated=Tiso_gene_1156}}
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{{#set: in pathway=LYSINE-AMINOAD-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana}}
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Latest revision as of 20:08, 21 March 2018

Gene Tiso_gene_15401

  • right end position:
    • 4995
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2888
  • centisome position:
    • 57.335716
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15401&oldid=46252"