Difference between revisions of "RXN490-3641"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BCCP-dimers BCCP-dimers] == * common name: ** a biotinylated [BCCP dimer] * Synonym(s): ** a bi...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] == * direction: ** LEFT-TO-RIGHT * common name: ** proline,2-oxoglutarate-...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=BCCP-dimers BCCP-dimers] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN490-3641 RXN490-3641] ==
 +
* direction:
 +
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** a biotinylated [BCCP dimer]
+
** proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
 
* Synonym(s):
 
* Synonym(s):
−
** a biotinylated [biotin-carboxy-carrier-protein dimer]
+
** prolyl hydroxylase
 +
** prolyl 4-hydroxylase
 +
** proline,2-oxoglutarate 4-dioxygenase
 +
** proline hydroxylase
 +
** protocollagen hydroxylase
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[BIOTIN-CARBOXYL-RXN]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[PRO]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[4-HYDROXY-L-PROLINE]][c]
−
* [[RXN-7101]]
+
* With common name(s):
−
* [[RXN0-5055]]
+
** 1 2-oxoglutarate[c] '''+''' 1 L-proline[c] '''+''' 1 oxygen[c] '''=>''' 1 CO2[c] '''+''' 1 succinate[c] '''+''' 1 trans-4-hydroxy-L-proline[c]
−
== Reaction(s) of unknown directionality ==
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_6296]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_16842]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9636]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_3021]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18689]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_15328]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9035]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_13008]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Gene: [[Tiso_gene_15594]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9873]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18208]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9455]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_16122]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2158]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17919]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17823]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18933]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9227]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18145]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_292]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_2280]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_1468]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_18235]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_19638]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_9165]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_17593]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_8652]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-creinhardtii]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[manual]]
 +
** Source: [[manual-primary_network]]
 
== External links  ==
 
== External links  ==
−
{{#set: common name=a biotinylated [BCCP dimer]}}
+
* LIGAND-RXN:
−
{{#set: common name=a biotinylated [biotin-carboxy-carrier-protein dimer]}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R01252 R01252]
−
{{#set: consumed by=BIOTIN-CARBOXYL-RXN}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: produced by=RXN-7101|RXN0-5055}}
+
{{#set: common name=proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)}}
 +
{{#set: ec number=EC-1.14.11}}
 +
{{#set: common name=prolyl hydroxylase|prolyl 4-hydroxylase|proline,2-oxoglutarate 4-dioxygenase|proline hydroxylase|protocollagen hydroxylase}}
 +
{{#set: gene associated=Tiso_gene_6296|Tiso_gene_16842|Tiso_gene_9636|Tiso_gene_3021|Tiso_gene_18689|Tiso_gene_15328|Tiso_gene_9035|Tiso_gene_13008|Tiso_gene_15594|Tiso_gene_9873|Tiso_gene_18208|Tiso_gene_9455|Tiso_gene_16122|Tiso_gene_2158|Tiso_gene_17919|Tiso_gene_17823|Tiso_gene_18933|Tiso_gene_9227|Tiso_gene_18145|Tiso_gene_292|Tiso_gene_2280|Tiso_gene_1468|Tiso_gene_18235|Tiso_gene_19638|Tiso_gene_9165|Tiso_gene_17593|Tiso_gene_8652}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=orthology|manual}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|manual-primary_network|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 20:08, 21 March 2018

Reaction RXN490-3641

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • proline,2-oxoglutarate-4-dioxygenase (cis-4-hydroxy-L-proline)
  • ec number:
  • Synonym(s):
    • prolyl hydroxylase
    • prolyl 4-hydroxylase
    • proline,2-oxoglutarate 4-dioxygenase
    • proline hydroxylase
    • protocollagen hydroxylase

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN490-3641&oldid=46284"