Difference between revisions of "Tiso gene 18603"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-470 RXN66-470] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-methyl-branched fatty acy...")
(Created page with "Category:Gene == Gene Tiso_gene_18603 == * right end position: ** 2318 * transcription direction: ** POSITIVE * left end position: ** 34 * centisome position: ** 1.1663808...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-470 RXN66-470] ==
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== Gene Tiso_gene_18603 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2318
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* common name:
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* transcription direction:
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** 3-methyl-branched fatty acyl-CoA 2-hydroxylase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.14.11 EC-1.14.11]
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** 34
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* centisome position:
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** 1.1663808   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN]]
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** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''=>''' 1 [[2-OH-3-Methyl-Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[SUC]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 oxygen[c] '''+''' 1 a 3-methyl-branched 2,3,4-saturated fatty acyl-CoA[c] '''+''' 1 2-oxoglutarate[c] '''=>''' 1 a 2-hydroxy-3-methyl-branched 2,3,4-saturated fatty acyl-CoA[c] '''+''' 1 succinate[c] '''+''' 1 CO2[c]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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== Genes associated with this reaction  ==
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** Source: [[orthology-athaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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** Source: [[orthology-synechocystis]]
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* [[Tiso_gene_561]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_16200]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14707]]
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** [[pantograph]]-[[esiliculosus]]
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* [[Tiso_gene_14450]]
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** [[pantograph]]-[[esiliculosus]]
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== Pathways  ==
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* [[PWY66-387]], fatty acid α-oxidation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-387 PWY66-387]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-creinhardtii]]
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== Pathways associated ==
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* [[HOMOSERSYN-PWY]]
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* [[PWY-7153]]
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* [[DAPLYSINESYN-PWY]]
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* [[PWY-2942]]
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* [[PWY-2941]]
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* [[PWY-6559]]
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* [[PWY-5097]]
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* [[PWY-6562]]
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* [[P101-PWY]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2318}}
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{{#set: common name=3-methyl-branched fatty acyl-CoA 2-hydroxylase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-1.14.11}}
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{{#set: left end position=34}}
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{{#set: gene associated=Tiso_gene_561|Tiso_gene_16200|Tiso_gene_14707|Tiso_gene_14450}}
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{{#set: centisome position=1.1663808    }}
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{{#set: in pathway=PWY66-387}}
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{{#set: reaction associated=ASPARTATE-SEMIALDEHYDE-DEHYDROGENASE-RXN}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=HOMOSERSYN-PWY|PWY-7153|DAPLYSINESYN-PWY|PWY-2942|PWY-2941|PWY-6559|PWY-5097|PWY-6562|P101-PWY}}
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{{#set: reconstruction source=orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 20:08, 21 March 2018

Gene Tiso_gene_18603

  • right end position:
    • 2318
  • transcription direction:
    • POSITIVE
  • left end position:
    • 34
  • centisome position:
    • 1.1663808
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18603&oldid=46310"