Difference between revisions of "RXN-16137"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Gene == Gene Tiso_gene_7387 == * left end position: ** 6776 * transcription direction: ** POSITIVE * right end position: ** 9600 * centisome position: ** 60.33300...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16137 RXN-16137] == * direction: ** LEFT-TO-RIGHT * common name: ** thiolase ** acetyl-_c-acety...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Gene]]
+
[[Category:Reaction]]
−
== Gene Tiso_gene_7387 ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16137 RXN-16137] ==
−
* left end position:
+
* direction:
−
** 6776
+
** LEFT-TO-RIGHT
−
* transcription direction:
+
* common name:
−
** POSITIVE
+
** thiolase
−
* right end position:
+
** acetyl-_c-acetyltransferase
−
** 9600
+
** 3-ketoacyl-_thiolase
−
* centisome position:
+
* ec number:
−
** 60.333008   
+
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reactions associated ==
+
== Reaction Formula ==
−
* [[ATPASE-RXN]]
+
* With identifiers:
−
** in-silico_annotation
+
** 1 [[CPD-17388]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-17312]][c]
−
***ec-number
+
* With common name(s):
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 docosahexaenoyl-CoA[c]
−
** in-silico_annotation
+
 
−
***ec-number
+
== Genes associated with this reaction  ==
−
* [[RXN-12195]]
+
Genes have been associated with this reaction based on different elements listed below.
−
** in-silico_annotation
+
* Gene: [[Tiso_gene_17451]]
−
***ec-number
+
** Source: [[annotation-in-silico_annotation]]
−
* [[RXN-12196]]
+
*** Assignment: EC-NUMBER
−
** in-silico_annotation
+
** Source: [[annotation-experimental_annotation]]
−
***ec-number
+
*** Assignment: EC-NUMBER
−
* [[RXN0-5462]]
+
* Gene: [[Tiso_gene_15327]]
−
** in-silico_annotation
+
** Source: [[annotation-experimental_annotation]]
−
***ec-number
+
*** Assignment: EC-NUMBER
−
== Pathways associated ==
+
* Gene: [[Tiso_gene_3856]]
−
* [[PWY-7184]]
+
** Source: [[annotation-in-silico_annotation]]
−
* [[PWY-7198]]
+
*** Assignment: EC-NUMBER
−
* [[PWY-6545]]
+
* Gene: [[Tiso_gene_10116]]
−
* [[PWY-7210]]
+
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_3855]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: EC-NUMBER
 +
== Pathways ==
 +
* [[PWY-7606]], docosahexaenoate biosynthesis III (6-desaturase, mammals): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7606 PWY-7606]
 +
** '''14''' reactions found over '''14''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[annotation]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Tool: [[pathwaytools]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
{{#set: left end position=6776}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: transcription direction=POSITIVE}}
+
{{#set: common name=thiolase}}
−
{{#set: right end position=9600}}
+
{{#set: common name=acetyl-_c-acetyltransferase}}
−
{{#set: centisome position=60.333008    }}
+
{{#set: common name=3-ketoacyl-_thiolase}}
−
{{#set: reaction associated=ATPASE-RXN|NUCLEOSIDE-TRIPHOSPHATASE-RXN|RXN-12195|RXN-12196|RXN0-5462}}
+
{{#set: ec number=EC-2.3.1.16}}
−
{{#set: pathway associated=PWY-7184|PWY-7198|PWY-6545|PWY-7210}}
+
{{#set: gene associated=Tiso_gene_17451|Tiso_gene_15327|Tiso_gene_3856|Tiso_gene_10116|Tiso_gene_3855}}
 +
{{#set: in pathway=PWY-7606}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:09, 21 March 2018

Reaction RXN-16137

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thiolase
    • acetyl-_c-acetyltransferase
    • 3-ketoacyl-_thiolase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 3-oxo-(6Z,9Z,12Z,15Z,18Z,21Z)-tetracosahexaenoyl-CoA[c] + 1 coenzyme A[c] => 1 acetyl-CoA[c] + 1 docosahexaenoyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7606, docosahexaenoate biosynthesis III (6-desaturase, mammals): PWY-7606
    • 14 reactions found over 14 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-16137&oldid=46342"