Difference between revisions of "OCTAPRENYL-DIPHOSPHATE"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.179-RXN 2.3.1.179-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxoacyl-(acyl-car...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-DIPHOSPHATE OCTAPRENYL-DIPHOSPHATE] == * smiles: ** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CC...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.3.1.179-RXN 2.3.1.179-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=OCTAPRENYL-DIPHOSPHATE OCTAPRENYL-DIPHOSPHATE] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
 
* common name:
 
* common name:
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** 3-oxoacyl-(acyl-carrier-protein)_synthase
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** all-trans-octaprenyl diphosphate
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** ORF
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* inchi key:
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* ec number:
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** InChIKey=IKKLDISSULFFQO-DJMILUHSSA-K
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** [http://enzyme.expasy.org/EC/2.3.1.179 EC-2.3.1.179]
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* molecular weight:
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** 719.897   
 
* Synonym(s):
 
* Synonym(s):
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** farnesylfarnesylgeranyl-PP
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** octaprenyl pyrophosphate
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** OPP
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** farnesylfarnesylgeraniol
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** octaprenyl diphosphate
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[4OHBENZOATE-OCTAPRENYLTRANSFER-RXN]]
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** 1 [[PROTON]][c] '''+''' 1 [[MALONYL-ACP]][c] '''+''' 1 [[Palmitoleoyl-ACPs]][c] '''=>''' 1 [[3-oxo-cis-vaccenoyl-ACPs]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[ACP]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 H+[c] '''+''' 1 a malonyl-[acp][c] '''+''' 1 a palmitoleoyl-[acp][c] '''=>''' 1 a 3-oxo-cis-vacc-11-enoyl-[acp][c] '''+''' 1 CO2[c] '''+''' 1 a holo-[acyl-carrier protein][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_19302]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_14485]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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* Gene: [[Tiso_gene_19303]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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== Pathways  ==
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* [[PWY-5973]], cis-vaccenate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5973 PWY-5973]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* LIGAND-CPD:
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein)_synthase}}
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** [http://www.genome.jp/dbget-bin/www_bget?C04146 C04146]
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{{#set: common name=ORF}}
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* HMDB : HMDB01094
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{{#set: ec number=EC-2.3.1.179}}
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* CHEBI:
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{{#set: gene associated=Tiso_gene_19302|Tiso_gene_14485|Tiso_gene_19303}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=57711 57711]
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{{#set: in pathway=PWY-5973}}
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* BIGG : octdp
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{{#set: reconstruction category=annotation}}
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* PUBCHEM:
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25245331 25245331]
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: smiles=CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]}}
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{{#set: common name=all-trans-octaprenyl diphosphate}}
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{{#set: inchi key=InChIKey=IKKLDISSULFFQO-DJMILUHSSA-K}}
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{{#set: molecular weight=719.897    }}
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{{#set: common name=farnesylfarnesylgeranyl-PP|octaprenyl pyrophosphate|OPP|farnesylfarnesylgeraniol|octaprenyl diphosphate}}
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{{#set: consumed by=4OHBENZOATE-OCTAPRENYLTRANSFER-RXN}}

Latest revision as of 20:09, 21 March 2018

Metabolite OCTAPRENYL-DIPHOSPHATE

  • smiles:
    • CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-]
  • common name:
    • all-trans-octaprenyl diphosphate
  • inchi key:
    • InChIKey=IKKLDISSULFFQO-DJMILUHSSA-K
  • molecular weight:
    • 719.897
  • Synonym(s):
    • farnesylfarnesylgeranyl-PP
    • octaprenyl pyrophosphate
    • OPP
    • farnesylfarnesylgeraniol
    • octaprenyl diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCOP(=O)([O-])OP(=O)([O-])[O-" cannot be used as a page name in this wiki.



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