Difference between revisions of "RXN-10697"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5098 RXN0-5098] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoate-protein_ligase_a **...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10697 RXN-10697] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5098 RXN0-5098] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10697 RXN-10697] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** lipoate-protein_ligase_a
 
−
** lipoate-protein_ligase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.1.20 EC-6.3.1.20]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-195]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[Lipoyl-Protein-L-Lysine]][c] '''=>''' 1 [[Octanoylated-domains]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CPD-11518]][c] '''=>''' 1 [[CPD-11519]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 octanoate[c] '''+''' 1 ATP[c] '''+''' 1 a [lipoyl-carrier protein]-L-lysine[c] '''=>''' 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 1 H2O[c] '''+''' 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-2-enoyl-CoA[c] '''=>''' 1 OPC8-3-hydroxyacyl-CoA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_17215]]
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* Gene: [[Tiso_gene_16145]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
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* Gene: [[Tiso_gene_14262]]
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* [[Tiso_gene_17216]]
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** Source: [[orthology-esiliculosus]]
−
** IN-SILICO_ANNOTATION
+
* Gene: [[Tiso_gene_6885]]
−
***AUTOMATED-NAME-MATCH
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** Source: [[orthology-esiliculosus]]
−
* [[Tiso_gene_4494]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_8713]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[Tiso_gene_4493]]
+
−
** IN-SILICO_ANNOTATION
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1275]], lipoate biosynthesis and incorporation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1275 PWY0-1275]
+
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''15''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[annotation]]:
+
* Category: [[orthology]]
−
** [[pathwaytools]]:
+
** Source: [[orthology-esiliculosus]]
−
*** [[in-silico_annotation]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=lipoate-protein_ligase_a}}
+
{{#set: ec number=EC-4.2.1.17}}
−
{{#set: common name=lipoate-protein_ligase}}
+
{{#set: gene associated=Tiso_gene_16145|Tiso_gene_14262|Tiso_gene_6885}}
−
{{#set: ec number=EC-6.3.1.20}}
+
{{#set: in pathway=PWY-735}}
−
{{#set: gene associated=Tiso_gene_17215|Tiso_gene_17216|Tiso_gene_4494|Tiso_gene_8713|Tiso_gene_4493}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: in pathway=PWY0-1275}}
+
{{#set: reconstruction source=orthology-esiliculosus}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=in-silico_annotation}}
+

Latest revision as of 21:09, 21 March 2018

Reaction RXN-10697

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-octa-2-enoyl-CoA[c] => 1 OPC8-3-hydroxyacyl-CoA[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 15 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-10697&oldid=46376"