Difference between revisions of "RXN-1126"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13375 CPD-13375] == * smiles: ** C1(C(C(C(C(O1)OCC2(OC(C(O)C(O)C(O)2)OC4(C(O)C(O)C(OC(COC3(...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13375 CPD-13375] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] ==
−
* smiles:
+
* direction:
−
** C1(C(C(C(C(O1)OCC2(OC(C(O)C(O)C(O)2)OC4(C(O)C(O)C(OC(COC3(C(C(C(CO3)O)O)O))4)OC6(C(O)C(O)C(OC(COC5(C(C(C(CO5)O)O)O))6)OC7(C(O)C(O)C(O)OC(CO)7)))))O)O)O)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
* ec number:
−
** InChIKey=PZUPAGRIHCRVKN-SPHBQONKSA-N
+
** [http://enzyme.expasy.org/EC/6.2.1.12 EC-6.2.1.12]
−
* common name:
+
−
** XXXG xyloglucan oligosaccharide
+
−
* molecular weight:
+
−
** 1062.931   
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-12400]]
+
** 1 [[ATP]][c] '''+''' 1 [[CPD-676]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[PPI]][c]
−
* [[RXN-12399]]
+
* With common name(s):
−
* [[RXN-12398]]
+
** 1 ATP[c] '''+''' 1 trans-caffeate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 AMP[c] '''+''' 1 trans-caffeoyl-CoA[c] '''+''' 1 diphosphate[c]
−
== Reaction(s) of unknown directionality ==
+
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[Tiso_gene_14183]]
 +
** Source: [[orthology-esiliculosus]]
 +
* Gene: [[Tiso_gene_12275]]
 +
** Source: [[orthology-athaliana]]
 +
** Source: [[orthology-esiliculosus]]
 +
== Pathways  ==
 +
* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
 +
** '''3''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
 +
** '''9''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY-6673]], caffeoylglucarate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6673 PWY-6673]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-athaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-esiliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* LIGAND-RXN:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=52940180 52940180]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01943 R01943]
−
{{#set: smiles=C1(C(C(C(C(O1)OCC2(OC(C(O)C(O)C(O)2)OC4(C(O)C(O)C(OC(COC3(C(C(C(CO3)O)O)O))4)OC6(C(O)C(O)C(OC(COC5(C(C(C(CO5)O)O)O))6)OC7(C(O)C(O)C(O)OC(CO)7)))))O)O)O)}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: inchi key=InChIKey=PZUPAGRIHCRVKN-SPHBQONKSA-N}}
+
{{#set: ec number=EC-6.2.1.12}}
−
{{#set: common name=XXXG xyloglucan oligosaccharide}}
+
{{#set: gene associated=Tiso_gene_14183|Tiso_gene_12275}}
−
{{#set: molecular weight=1062.931    }}
+
{{#set: in pathway=PWY-7398|PWY-1121|PWY-6673}}
−
{{#set: produced by=RXN-12400|RXN-12399|RXN-12398}}
+
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-athaliana|orthology-esiliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 21:09, 21 March 2018

Reaction RXN-1126

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 trans-caffeate[c] + 1 coenzyme A[c] => 1 AMP[c] + 1 trans-caffeoyl-CoA[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7398, coumarins biosynthesis (engineered): PWY-7398
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 9 reactions found over 19 reactions in the full pathway
  • PWY-6673, caffeoylglucarate biosynthesis: PWY-6673
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-1126&oldid=46381"