Difference between revisions of "MCDH"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14274 RXN-14274] == * direction: ** REVERSIBLE * common name: ** decanoyl-CoA C-acyltransferase...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH MCDH] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-methylacyl-coa dehydrogenase, 2-Met...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14274 RXN-14274] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=MCDH MCDH] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** decanoyl-CoA C-acyltransferase
+
** 2-methylacyl-coa dehydrogenase, 2-Methylprop-2-enoyl-CoA forming
−
** acetyl-_c-acetyltransferase
+
−
** 3-ketoacyl-_thiolase
+
−
** thiolase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD-10267]][c] '''+''' 1 [[ACETYL-COA]][c] '''<=>''' 1 [[CPD0-2105]][c] '''+''' 1 [[CO-A]][c]
+
** 1.0 [[FAD]][m] '''+''' 1.0 [[ISOBUTYRYL-COA]][m] '''=>''' 1.0 [[METHACRYLYL-COA]][m] '''+''' 1.0 [[FADH2]][m]
 
* With common name(s):
 
* With common name(s):
−
** 1 decanoyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''<=>''' 1 3-oxododecanoyl-CoA[c] '''+''' 1 coenzyme A[c]
+
** 1.0 FAD[m] '''+''' 1.0 isobutanoyl-CoA[m] '''=>''' 1.0 methylacrylyl-CoA[m] '''+''' 1.0 FADH2[m]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3855]]
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* Gene: [[Tiso_gene_10643]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***EC-NUMBER
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* Gene: [[Tiso_gene_16113]]
−
** EXPERIMENTAL_ANNOTATION
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** Source: [[orthology-creinhardtii]]
−
***EC-NUMBER
+
−
* [[Tiso_gene_17451]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_3856]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_16181]]
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−
** [[pantograph]]-[[athaliana]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15327]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_10116]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[orthology-creinhardtii]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
−
** Source: [[orthology-esiliculosus]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[annotation]]
 
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
−
** Source: [[annotation-in-silico_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31185 31185]
+
{{#set: common name=2-methylacyl-coa dehydrogenase, 2-Methylprop-2-enoyl-CoA forming}}
−
* LIGAND-RXN:
+
{{#set: gene associated=Tiso_gene_10643|Tiso_gene_16113}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R04742 R04742]
+
−
{{#set: direction=REVERSIBLE}}
+
−
{{#set: common name=decanoyl-CoA C-acyltransferase}}
+
−
{{#set: common name=acetyl-_c-acetyltransferase}}
+
−
{{#set: common name=3-ketoacyl-_thiolase}}
+
−
{{#set: common name=thiolase}}
+
−
{{#set: ec number=EC-2.3.1.16}}
+
−
{{#set: gene associated=Tiso_gene_3855|Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_16181|Tiso_gene_15327|Tiso_gene_10116}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction source=annotation-experimental_annotation|orthology-athaliana|annotation-in-silico_annotation|orthology-esiliculosus}}
+
{{#set: reconstruction source=orthology-creinhardtii}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 21:09, 21 March 2018

Reaction MCDH

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 2-methylacyl-coa dehydrogenase, 2-Methylprop-2-enoyl-CoA forming
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1.0 FAD[m] + 1.0 isobutanoyl-CoA[m] => 1.0 methylacrylyl-CoA[m] + 1.0 FADH2[m]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=MCDH&oldid=46384"