Difference between revisions of "RXN-9553"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOHEPTULOSE-BISPHOSPHATASE-RXN SEDOHEPTULOSE-BISPHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9553 RXN-9553] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-hydroxypetroselinoyl-[acyl-...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=SEDOHEPTULOSE-BISPHOSPHATASE-RXN SEDOHEPTULOSE-BISPHOSPHATASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9553 RXN-9553] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* common name:
 
* common name:
−
** sedoheptulose-_-bisphosphatase
+
** 3-hydroxypetroselinoyl-[acyl-carrier protein] dehydratase
−
** sbpase
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.1.3.37 EC-3.1.3.37]
+
** [http://enzyme.expasy.org/EC/4.2.1 EC-4.2.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[D-SEDOHEPTULOSE-1-7-P2]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[D-SEDOHEPTULOSE-7-P]][c]
+
** 1 [[R-3-hydroxypetroselinoyl-ACPs]][c] '''=>''' 1 [[Petrosel-2-enoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 D-sedoheptulose-1,7-bisphosphate[c] '''+''' 1 H2O[c] '''=>''' 1 phosphate[c] '''+''' 1 D-sedoheptulose 7-phosphate[c]
+
** 1 a (3R)-3-hydroxypetroselinoyl-[acp][c] '''=>''' 1 a (2E,6Z)-octadeca-2,6-dienoyl-[acp][c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
−
Genes have been associated with this reaction based on different elements listed below.
 
−
* [[Tiso_gene_4905]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
* [[Tiso_gene_8226]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
* [[Tiso_gene_9435]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[athaliana]]
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
* [[Tiso_gene_16502]]
 
−
** IN-SILICO_ANNOTATION
 
−
***EC-NUMBER
 
−
** EXPERIMENTAL_ANNOTATION
 
−
***EC-NUMBER
 
−
** [[pantograph]]-[[esiliculosus]]
 
−
** [[pantograph]]-[[creinhardtii]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[CALVIN-PWY]], Calvin-Benson-Bassham cycle: [http://metacyc.org/META/NEW-IMAGE?object=CALVIN-PWY CALVIN-PWY]
+
* [[PWY-5367]], petroselinate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5367 PWY-5367]
−
** '''13''' reactions found over '''13''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[annotation]]
−
** [[pantograph]]:
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[creinhardtii]]
+
*** Tool: [[pathwaytools]]
−
*** [[esiliculosus]]
+
** Source: [[annotation-experimental_annotation]]
−
*** [[athaliana]]
+
*** Tool: [[pathwaytools]]
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17461 17461]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01845 R01845]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P23014 P23014]
 
−
** [http://www.uniprot.org/uniprot/P46285 P46285]
 
−
** [http://www.uniprot.org/uniprot/P46283 P46283]
 
−
** [http://www.uniprot.org/uniprot/P46284 P46284]
 
−
** [http://www.uniprot.org/uniprot/O23780 O23780]
 
−
** [http://www.uniprot.org/uniprot/O20252 O20252]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=sedoheptulose-_-bisphosphatase}}
+
{{#set: common name=3-hydroxypetroselinoyl-[acyl-carrier protein] dehydratase}}
−
{{#set: common name=sbpase}}
+
{{#set: ec number=EC-4.2.1}}
−
{{#set: ec number=EC-3.1.3.37}}
+
{{#set: in pathway=PWY-5367}}
−
{{#set: gene associated=Tiso_gene_4905|Tiso_gene_8226|Tiso_gene_9435|Tiso_gene_16502}}
+
−
{{#set: in pathway=CALVIN-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|esiliculosus|athaliana}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
 

Latest revision as of 20:09, 21 March 2018

Reaction RXN-9553

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxypetroselinoyl-[acyl-carrier protein] dehydratase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Pathways

  • PWY-5367, petroselinate biosynthesis: PWY-5367
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

"3-hydroxypetroselinoyl-[acyl-carrier protein] dehydratase" cannot be used as a page name in this wiki.



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