Difference between revisions of "Tiso gene 19475"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14382 RXN-14382] == * direction: ** LEFT-TO-RIGHT * common name: ** cysteine_mitochondrial ** c...")
(Created page with "Category:Gene == Gene Tiso_gene_19475 == * right end position: ** 2194 * transcription direction: ** POSITIVE * left end position: ** 2 * centisome position: ** 8.71839600...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14382 RXN-14382] ==
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== Gene Tiso_gene_19475 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2194
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* common name:
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* transcription direction:
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** cysteine_mitochondrial
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** POSITIVE
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** cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf
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* left end position:
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** 2
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* centisome position:
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** 8.71839600e-2
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PEPCARBOXYKIN-RXN]]
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** 1 [[Sulfur-Carrier-Proteins-ThiI]][c] '''+''' 1 [[L-Cysteine-Desulfurase-persulfide]][c] '''=>''' 1 [[Cysteine-Desulfurase-L-cysteine]][c] '''+''' 1 [[Sulfurylated-ThiI]][c]
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* With common name(s):
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** 1 a ThiI sulfur-carrier protein[c] '''+''' 1 an [L-cysteine desulfurase] L-cysteine persulfide[c] '''=>''' 1 an [L-cysteine desulfurase]-L-cysteine[c] '''+''' 1 an S-sulfanyl-[ThiI sulfur-carrier protein][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[Tiso_gene_14710]]
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** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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*** Assignment: automated-name-match
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** Source: [[orthology-athaliana]]
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
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* Gene: [[Tiso_gene_11478]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-creinhardtii]]
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*** Assignment: EC-NUMBER
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== Pathways associated ==
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** Source: [[annotation-experimental_annotation]]
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* [[PWY-561]]
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*** Assignment: EC-NUMBER
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* [[GLUCONEO-PWY]]
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** Source: [[orthology-esiliculosus]]
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* [[PWY-7117]]
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* Gene: [[Tiso_gene_4284]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: EC-NUMBER
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** Source: [[orthology-esiliculosus]]
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== Pathways ==
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* [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-esiliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2194}}
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{{#set: common name=cysteine_mitochondrial}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=cysteine_desulfurase_for_iron-sulfur_cluster_formation_suf}}
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{{#set: left end position=2}}
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{{#set: gene associated=Tiso_gene_14710|Tiso_gene_11478|Tiso_gene_4284}}
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{{#set: centisome position=8.71839600e-2}}
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{{#set: in pathway=PWY-6892}}
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{{#set: reaction associated=PEPCARBOXYKIN-RXN}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=PWY-561|GLUCONEO-PWY|PWY-7117}}
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{{#set: reconstruction source=annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:09, 21 March 2018

Gene Tiso_gene_19475

  • right end position:
    • 2194
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2
  • centisome position:
    • 8.71839600e-2
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_19475&oldid=46434"