Difference between revisions of "Tiso gene 6340"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://e...")
(Created page with "Category:Gene == Gene Tiso_gene_6340 == * right end position: ** 1464 * transcription direction: ** POSITIVE * left end position: ** 66 * centisome position: ** 0.53610593...")
 
(2 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARYLFORMAMIDASE-RXN ARYLFORMAMIDASE-RXN] ==
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== Gene Tiso_gene_6340 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 1464
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/3.5.1.9 EC-3.5.1.9]
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** POSITIVE
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* left end position:
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** 66
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* centisome position:
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** 0.53610593   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[D-THREO-ALDOSE-1-DEHYDROGENASE-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[N-FORMYLKYNURENINE]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-14736]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 N-formylkynurenine[c] '''=>''' 1 formate[c] '''+''' 1 H+[c] '''+''' 1 L-kynurenine[c]
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* Reaction: [[PYRIDOXAL-4-DEHYDROGENASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_16921]]
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* [[PWY-5499]]
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** [[pantograph]]-[[creinhardtii]]
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== Pathways  ==
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* [[PWY-7765]], 3-hydroxy-4-methyl-anthranilate biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7765 PWY-7765]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5651]], L-tryptophan degradation to 2-amino-3-carboxymuconate semialdehyde: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5651 PWY-5651]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[TRPCAT-PWY]], L-tryptophan degradation I (via anthranilate): [http://metacyc.org/META/NEW-IMAGE?object=TRPCAT-PWY TRPCAT-PWY]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6309]], L-tryptophan degradation XI (mammalian, via kynurenine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309]
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** '''9''' reactions found over '''17''' reactions in the full pathway
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* [[PWY-7717]], 3-hydroxy-4-methyl-anthranilate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7717 PWY-7717]
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** '''2''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[creinhardtii]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=1464}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13009 13009]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=66}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01959 R01959]
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{{#set: centisome position=0.53610593    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=D-THREO-ALDOSE-1-DEHYDROGENASE-RXN|PYRIDOXAL-4-DEHYDROGENASE-RXN}}
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{{#set: ec number=EC-3.5.1.9}}
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{{#set: pathway associated=PWY-5499}}
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{{#set: gene associated=Tiso_gene_16921}}
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{{#set: in pathway=PWY-7765|PWY-5651|TRPCAT-PWY|PWY-6309|PWY-7717}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=creinhardtii}}
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Latest revision as of 20:09, 21 March 2018

Gene Tiso_gene_6340

  • right end position:
    • 1464
  • transcription direction:
    • POSITIVE
  • left end position:
    • 66
  • centisome position:
    • 0.53610593
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_6340&oldid=46436"