Difference between revisions of "Tiso gene 4975"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TOCOPHEROL-O-METHYLTRANSFERASE-RXN TOCOPHEROL-O-METHYLTRANSFERASE-RXN] == * direction: ** LEFT-TO-R...")
 
(Created page with "Category:Gene == Gene Tiso_gene_4975 == * right end position: ** 12260 * transcription direction: ** POSITIVE * left end position: ** 8336 * centisome position: ** 59.1835...")
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TOCOPHEROL-O-METHYLTRANSFERASE-RXN TOCOPHEROL-O-METHYLTRANSFERASE-RXN] ==
+
== Gene Tiso_gene_4975 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 12260
−
* ec number:
+
* transcription direction:
−
** [http://enzyme.expasy.org/EC/2.1.1.95 EC-2.1.1.95]
+
** POSITIVE
 +
* left end position:
 +
** 8336
 +
* centisome position:
 +
** 59.183525   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[CARBPSYN-RXN]]
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[GAMA-TOCOPHEROL]][c] '''=>''' 1 [[ALPHA-TOCOPHEROL]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[annotation-in-silico_annotation]]
−
* With common name(s):
+
*** Assignment: ec-number
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 γ-tocopherol[c] '''=>''' 1 α-tocopherol[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c]
+
** Source: [[annotation-experimental_annotation]]
−
 
+
*** Assignment: automated-name-match
−
== Genes associated with this reaction  ==
+
* Reaction: [[GLUTAMIN-RXN]]
−
Genes have been associated with this reaction based on different elements listed below.
+
** Source: [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_6738]]
+
*** Assignment: ec-number
−
** [[pantograph]]-[[synechocystis]]
+
** Source: [[annotation-experimental_annotation]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** Assignment: automated-name-match
−
== Pathways ==
+
* Reaction: [[RXN-13202]]
−
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422]
+
** Source: [[annotation-in-silico_annotation]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
*** Assignment: ec-number
−
== Reconstruction information  ==
+
** Source: [[annotation-experimental_annotation]]
−
* [[orthology]]:
+
*** Assignment: ec-number
−
** [[pantograph]]:
+
* Reaction: [[RXN-14196]]
−
*** [[creinhardtii]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** [[synechocystis]]
+
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16909]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-16910]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-4984]]
 +
* [[GLUTAMINDEG-PWY]]
 +
* [[ARGSYN-PWY]]
 +
* [[PWY-5154]]
 +
* [[PWY-7400]]
 +
* [[ARGSYNBSUB-PWY]]
 +
* [[PWY-7693]]
 +
* [[PWY-7790]]
 +
* [[PWY-7791]]
 +
* [[PWY-5686]]
 +
* [[CITRULBIO-PWY]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=12260}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24012 24012]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=8336}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R07236 R07236]
+
{{#set: centisome position=59.183525    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=CARBPSYN-RXN|GLUTAMIN-RXN|RXN-13202|RXN-14196|RXN-16909|RXN-16910}}
−
{{#set: ec number=EC-2.1.1.95}}
+
{{#set: pathway associated=PWY-4984|GLUTAMINDEG-PWY|ARGSYN-PWY|PWY-5154|PWY-7400|ARGSYNBSUB-PWY|PWY-7693|PWY-7790|PWY-7791|PWY-5686|CITRULBIO-PWY}}
−
{{#set: gene associated=Tiso_gene_6738}}
+
−
{{#set: in pathway=PWY-1422}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=creinhardtii|synechocystis}}
+

Latest revision as of 21:09, 21 March 2018

Gene Tiso_gene_4975

  • right end position:
    • 12260
  • transcription direction:
    • POSITIVE
  • left end position:
    • 8336
  • centisome position:
    • 59.183525
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_4975&oldid=46444"