Difference between revisions of "Tiso gene 18338"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12611 RXN-12611] == * direction: ** LEFT-TO-RIGHT * common name: ** thiamin phosphate synthase...")
(Created page with "Category:Gene == Gene Tiso_gene_18338 == * right end position: ** 2470 * transcription direction: ** POSITIVE * left end position: ** 918 * centisome position: ** 29.80519...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12611 RXN-12611] ==
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== Gene Tiso_gene_18338 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2470
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* common name:
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* transcription direction:
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** thiamin phosphate synthase
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** POSITIVE
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** ORF
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* left end position:
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** thiamine_monophosphate_synthase
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** 918
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* ec number:
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* centisome position:
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** [http://enzyme.expasy.org/EC/2.5.1.3 EC-2.5.1.3]
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** 29.805195   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[PYRROLINECARBDEHYDROG-RXN]]
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** 1 [[AMINO-HYDROXYMETHYL-METHYLPYRIMIDINE-PP]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[CPD-13575]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[THIAMINE-P]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 4-amino-2-methyl-5-(diphosphomethyl)pyrimidine[c] '''+''' 2 H+[c] '''+''' 1 2-[(2R,5Z)-2-carboxy-4-methylthiazol-5(2H)-ylidene]ethyl phosphate[c] '''=>''' 1 diphosphate[c] '''+''' 1 thiamine phosphate[c] '''+''' 1 CO2[c]
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* Reaction: [[RXN-14116]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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== Pathways associated ==
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* [[Tiso_gene_10320]]
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* [[PROUT-PWY]]
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** IN-SILICO_ANNOTATION
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* [[ARGASEDEG-PWY]]
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***EC-NUMBER
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* [[PWY-6853]]
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* [[Tiso_gene_2159]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_2160]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways ==
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* [[PWY-6894]], thiamine diphosphate biosynthesis I (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6894 PWY-6894]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2470}}
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{{#set: common name=thiamin phosphate synthase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: common name=ORF}}
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{{#set: left end position=918}}
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{{#set: common name=thiamine_monophosphate_synthase}}
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{{#set: centisome position=29.805195    }}
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{{#set: ec number=EC-2.5.1.3}}
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{{#set: reaction associated=PYRROLINECARBDEHYDROG-RXN|RXN-14116}}
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{{#set: gene associated=Tiso_gene_10320|Tiso_gene_2159|Tiso_gene_2160}}
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{{#set: pathway associated=PROUT-PWY|ARGASEDEG-PWY|PWY-6853}}
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{{#set: in pathway=PWY-6894}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=in-silico_annotation}}
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Latest revision as of 21:10, 21 March 2018

Gene Tiso_gene_18338

  • right end position:
    • 2470
  • transcription direction:
    • POSITIVE
  • left end position:
    • 918
  • centisome position:
    • 29.805195
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18338&oldid=46495"