Difference between revisions of "RXN0-5184"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [http:...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5184 RXN0-5184] == * direction: ** LEFT-TO-RIGHT * common name: ** thymidine_phosphorylase * e...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=O-SUCCHOMOSERLYASE-RXN O-SUCCHOMOSERLYASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5184 RXN0-5184] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** thymidine_phosphorylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.48 EC-2.5.1.48]
+
** [http://enzyme.expasy.org/EC/2.4.1.1 EC-2.4.1.1]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''+''' 1 [[CYS]][c] '''<=>''' 1 [[PROTON]][c] '''+''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[SUC]][c]
+
** 1 [[Pi]][c] '''+''' 1 [[1-4-alpha-D-Glucan]][c] '''=>''' 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[GLC-1-P]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 O-succinyl-L-homoserine[c] '''+''' 1 L-cysteine[c] '''<=>''' 1 H+[c] '''+''' 1 L-cystathionine[c] '''+''' 1 succinate[c]
+
** 1 phosphate[c] '''+''' 1 a 1,4-&alpha;-D-glucan[c] '''=>''' 1 a 1,4-&alpha;-D-glucan[c] '''+''' 1 &alpha;-D-glucopyranose 1-phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_3732]]
+
* Gene: [[Tiso_gene_1011]]
−
** [[pantograph]]-[[athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
** [[pantograph]]-[[esiliculosus]]
+
*** Assignment: EC-NUMBER
−
** [[pantograph]]-[[creinhardtii]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-I9 PWY-I9]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
+
* Category: [[annotation]]
−
** Source: [[orthology-athaliana]]
+
** Source: [[annotation-in-silico_annotation]]
−
*** Tool: [[pantograph]]
+
*** Tool: [[pathwaytools]]
−
** Source: [[orthology-creinhardtii]]
+
−
*** Tool: [[pantograph]]
+
−
** Source: [[orthology-esiliculosus]]
+
−
*** Tool: [[pantograph]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
+
** [http://www.genome.jp/dbget-bin/www_bget?R06050 R06050]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R01821 R01821]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
+
** [http://www.uniprot.org/uniprot/Q9SD76 Q9SD76]
−
** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
+
** [http://www.uniprot.org/uniprot/P53537 P53537]
−
** [http://www.uniprot.org/uniprot/P38675 P38675]
+
** [http://www.uniprot.org/uniprot/Q42863 Q42863]
−
** [http://www.uniprot.org/uniprot/P24601 P24601]
+
** [http://www.uniprot.org/uniprot/P27598 P27598]
−
** [http://www.uniprot.org/uniprot/P00935 P00935]
+
** [http://www.uniprot.org/uniprot/O24363 O24363]
−
** [http://www.uniprot.org/uniprot/O04981 O04981]
+
** [http://www.uniprot.org/uniprot/P73546 P73546]
−
** [http://www.uniprot.org/uniprot/O04982 O04982]
+
** [http://www.uniprot.org/uniprot/P73511 P73511]
−
** [http://www.uniprot.org/uniprot/O81334 O81334]
+
** [http://www.uniprot.org/uniprot/P06738 P06738]
−
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
+
** [http://www.uniprot.org/uniprot/P39123 P39123]
−
{{#set: direction=REVERSIBLE}}
+
** [http://www.uniprot.org/uniprot/P09812 P09812]
−
{{#set: ec number=EC-2.5.1.48}}
+
** [http://www.uniprot.org/uniprot/P53535 P53535]
−
{{#set: gene associated=Tiso_gene_3732}}
+
** [http://www.uniprot.org/uniprot/Q9PSQ9 Q9PSQ9]
−
{{#set: in pathway=PWY-I9|HOMOSER-METSYN-PWY}}
+
** [http://www.uniprot.org/uniprot/P09811 P09811]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/Q00766 Q00766]
−
{{#set: reconstruction source=orthology-athaliana|orthology-creinhardtii|orthology-esiliculosus}}
+
** [http://www.uniprot.org/uniprot/Q7M385 Q7M385]
−
{{#set: reconstruction tool=pantograph}}
+
** [http://www.uniprot.org/uniprot/P00489 P00489]
 +
** [http://www.uniprot.org/uniprot/P04045 P04045]
 +
** [http://www.uniprot.org/uniprot/P00490 P00490]
 +
** [http://www.uniprot.org/uniprot/P0AC86 P0AC86]
 +
** [http://www.uniprot.org/uniprot/Q9PKE6 Q9PKE6]
 +
** [http://www.uniprot.org/uniprot/Q9CHM8 Q9CHM8]
 +
** [http://www.uniprot.org/uniprot/P45180 P45180]
 +
** [http://www.uniprot.org/uniprot/Q9Z8N1 Q9Z8N1]
 +
** [http://www.uniprot.org/uniprot/O84250 O84250]
 +
** [http://www.uniprot.org/uniprot/P34114 P34114]
 +
** [http://www.uniprot.org/uniprot/P32811 P32811]
 +
** [http://www.uniprot.org/uniprot/P11216 P11216]
 +
** [http://www.uniprot.org/uniprot/P11217 P11217]
 +
** [http://www.uniprot.org/uniprot/P06737 P06737]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=thymidine_phosphorylase}}
 +
{{#set: ec number=EC-2.4.1.1}}
 +
{{#set: gene associated=Tiso_gene_1011}}
 +
{{#set: in pathway=}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 20:10, 21 March 2018

Reaction RXN0-5184

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • thymidine_phosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN0-5184&oldid=46518"