Difference between revisions of "Tiso gene 10617"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17876 RXN-17876] == * direction: ** LEFT-TO-RIGHT * common name: ** methionine_aminopeptidase *...")
(Created page with "Category:Gene == Gene Tiso_gene_10617 == * right end position: ** 5351 * transcription direction: ** POSITIVE * left end position: ** 2539 * centisome position: ** 30.1902...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17876 RXN-17876] ==
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== Gene Tiso_gene_10617 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 5351
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* common name:
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* transcription direction:
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** methionine_aminopeptidase
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** POSITIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/3.4.11.18 EC-3.4.11.18]
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** 2539
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* centisome position:
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** 30.19025   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[ADPREDUCT-RXN]]
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** 1 [[WATER]][c] '''+''' 1 [[L-methionyl-L-seryl-Protein]][c] '''=>''' 1 [[MET]][c] '''+''' 1 [[N-terminal-L-Serine]][c]
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** Source: [[annotation-experimental_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 H2O[c] '''+''' 1 an N-terminal-L-methionyl-L-seryl-[protein][c] '''=>''' 1 L-methionine[c] '''+''' 1 an N-terminal L-seryl-[protein][c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-synechocystis]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[CDPREDUCT-RXN]]
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* [[Tiso_gene_4247]]
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** Source: [[annotation-experimental_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***AUTOMATED-NAME-MATCH
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** Source: [[orthology-athaliana]]
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* [[Tiso_gene_5715]]
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** Source: [[orthology-synechocystis]]
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** IN-SILICO_ANNOTATION
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** Source: [[orthology-esiliculosus]]
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***AUTOMATED-NAME-MATCH
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* Reaction: [[GDPREDUCT-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[annotation-experimental_annotation]]
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***AUTOMATED-NAME-MATCH
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*** Assignment: ec-number
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== Pathways  ==
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** Source: [[orthology-athaliana]]
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* [[PWY-7800]], Ac/N-end rule pathway: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7800 PWY-7800]
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** Source: [[orthology-synechocystis]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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** Source: [[orthology-esiliculosus]]
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== Reconstruction information  ==
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* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTI-RXN]]
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* Category: [[annotation]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RIBONUCLEOSIDE-DIP-REDUCTII-RXN]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-722]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-747]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN0-748]]
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** Source: [[annotation-experimental_annotation]]
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*** Assignment: ec-number
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[UDPREDUCT-RXN]]
 
** Source: [[annotation-experimental_annotation]]
 
** Source: [[annotation-experimental_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-athaliana]]
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*** Tool: [[pathwaytools]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-esiliculosus]]
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== Pathways associated ==
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* [[PWY-7210]]
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* [[PWY-7198]]
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* [[PWY-7220]]
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* [[PWY-7184]]
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* [[PWY-7222]]
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* [[PWY0-166]]
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* [[PWY-7227]]
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* [[PWY-7226]]
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* [[PWY-6545]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=5351}}
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{{#set: common name=methionine_aminopeptidase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-3.4.11.18}}
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{{#set: left end position=2539}}
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{{#set: gene associated=Tiso_gene_4247|Tiso_gene_5715}}
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{{#set: centisome position=30.19025    }}
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{{#set: in pathway=PWY-7800}}
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{{#set: reaction associated=ADPREDUCT-RXN|CDPREDUCT-RXN|GDPREDUCT-RXN|RIBONUCLEOSIDE-DIP-REDUCTI-RXN|RIBONUCLEOSIDE-DIP-REDUCTII-RXN|RXN0-722|RXN0-747|RXN0-748|UDPREDUCT-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-7210|PWY-7198|PWY-7220|PWY-7184|PWY-7222|PWY0-166|PWY-7227|PWY-7226|PWY-6545}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Latest revision as of 20:10, 21 March 2018

Gene Tiso_gene_10617

  • right end position:
    • 5351
  • transcription direction:
    • POSITIVE
  • left end position:
    • 2539
  • centisome position:
    • 30.19025
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_10617&oldid=46551"