Difference between revisions of "Tiso gene 3314"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] == * direction: ** LEFT-TO-RIGHT * Synonym(s): == Reaction Formula == * With...")
(Created page with "Category:Gene == Gene Tiso_gene_3314 == * right end position: ** 14388 * transcription direction: ** POSITIVE * left end position: ** 11991 * centisome position: ** 70.411...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14048 RXN-14048] ==
+
== Gene Tiso_gene_3314 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 14388
 +
* transcription direction:
 +
** POSITIVE
 +
* left end position:
 +
** 11991
 +
* centisome position:
 +
** 70.41104   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
−
** 1 [[L-CYSTATHIONINE]][c] '''=>''' 1 [[CPD-15056]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[PROTON]][c]
+
** Source: [[orthology-esiliculosus]]
−
* With common name(s):
+
* Reaction: [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
−
** 1 L-cystathionine[c] '''=>''' 1 (2Z)-2-aminobut-2-enoate[c] '''+''' 1 L-cysteine[c] '''+''' 1 H+[c]
+
** Source: [[orthology-esiliculosus]]
−
 
+
* Reaction: [[RXN-15684]]
−
== Genes associated with this reaction  ==
+
** Source: [[annotation-in-silico_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** Assignment: ec-number
−
* Gene: [[Tiso_gene_3732]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
== Pathways  ==
+
* Reaction: [[THIOL-OXIDASE-RXN]]
−
* [[HOMOCYSDEGR-PWY]], L-cysteine biosynthesis III (from L-homocysteine): [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSDEGR-PWY HOMOCYSDEGR-PWY]
+
** Source: [[annotation-in-silico_annotation]]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
*** Assignment: ec-number
−
* [[PWY-801]], L-homocysteine and L-cysteine interconversion: [http://metacyc.org/META/NEW-IMAGE?object=PWY-801 PWY-801]
+
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* Category: [[orthology]]
+
 
** Source: [[orthology-esiliculosus]]
 
** Source: [[orthology-esiliculosus]]
−
*** Tool: [[pantograph]]
+
== Pathways associated ==
 +
* [[PWY-7539]]
 +
* [[PWY-7533]]
 +
* [[PWY-6797]]
 +
* [[PWY-6147]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=14388}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24913 24913]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: left end position=11991}}
−
{{#set: gene associated=Tiso_gene_3732}}
+
{{#set: centisome position=70.41104    }}
−
{{#set: in pathway=HOMOCYSDEGR-PWY|PWY-801}}
+
{{#set: reaction associated=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN|RXN-15684|THIOL-OXIDASE-RXN}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: pathway associated=PWY-7539|PWY-7533|PWY-6797|PWY-6147}}
−
{{#set: reconstruction source=orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph}}
+

Latest revision as of 20:10, 21 March 2018

Gene Tiso_gene_3314

  • right end position:
    • 14388
  • transcription direction:
    • POSITIVE
  • left end position:
    • 11991
  • centisome position:
    • 70.41104
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3314&oldid=46582"