Difference between revisions of "RXN-14917"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/6....")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14917 RXN-14917] == * direction: ** LEFT-TO-RIGHT * common name: ** mpbq_msbq_methyltransferase...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14917 RXN-14917] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** mpbq_msbq_methyltransferase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.3.3.1 EC-6.3.3.1]
+
** [http://enzyme.expasy.org/EC/2.1.1.295 EC-2.1.1.295]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''=>''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CPD-11712]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-15834]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c] '''=>''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
+
** 1 2-methyl-6-geranylgeranyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_1369]]
+
* Gene: [[Tiso_gene_2596]]
−
** EXPERIMENTAL_ANNOTATION
+
** Source: [[annotation-in-silico_annotation]]
−
***AUTOMATED-NAME-MATCH
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[synechocystis]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
+
* [[PWY-7436]], vitamin E biosynthesis (tocotrienols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7436 PWY-7436]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
+
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
−
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
+
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
−
* Category: [[manual]]
 
−
** Source: [[manual-primary_network]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
−
** Source: [[annotation-experimental_annotation]]
 
−
*** Tool: [[pathwaytools]]
 
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23032 23032]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R04208 R04208]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P07244 P07244]
 
−
** [http://www.uniprot.org/uniprot/P12043 P12043]
 
−
** [http://www.uniprot.org/uniprot/P21872 P21872]
 
−
** [http://www.uniprot.org/uniprot/P08178 P08178]
 
−
** [http://www.uniprot.org/uniprot/P00967 P00967]
 
−
** [http://www.uniprot.org/uniprot/P16340 P16340]
 
−
** [http://www.uniprot.org/uniprot/P22102 P22102]
 
−
** [http://www.uniprot.org/uniprot/Q57656 Q57656]
 
−
** [http://www.uniprot.org/uniprot/O66968 O66968]
 
−
** [http://www.uniprot.org/uniprot/Q9JUA2 Q9JUA2]
 
−
** [http://www.uniprot.org/uniprot/P43848 P43848]
 
−
** [http://www.uniprot.org/uniprot/Q9PME0 Q9PME0]
 
−
** [http://www.uniprot.org/uniprot/Q64737 Q64737]
 
−
** [http://www.uniprot.org/uniprot/P20772 P20772]
 
−
** [http://www.uniprot.org/uniprot/Q55422 Q55422]
 
−
** [http://www.uniprot.org/uniprot/P52424 P52424]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.3.3.1}}
+
{{#set: common name=mpbq_msbq_methyltransferase}}
−
{{#set: gene associated=Tiso_gene_1369}}
+
{{#set: ec number=EC-2.1.1.295}}
−
{{#set: in pathway=PWY-6121|PWY-6122|PWY-6277}}
+
{{#set: gene associated=Tiso_gene_2596}}
−
{{#set: reconstruction category=orthology|manual|annotation}}
+
{{#set: in pathway=PWY-7436}}
−
{{#set: reconstruction source=annotation-experimental_annotation|manual-primary_network|annotation-in-silico_annotation|orthology-synechocystis}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+
{{#set: reconstruction source=annotation-in-silico_annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 21:11, 21 March 2018

Reaction RXN-14917

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • mpbq_msbq_methyltransferase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 2-methyl-6-geranylgeranyl-1,4-benzoquinol[c] + 1 S-adenosyl-L-methionine[c] => 1 H+[c] + 1 2,3-dimethyl-6-geranylgeranyl-1,4-benzoquinol[c] + 1 S-adenosyl-L-homocysteine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7436, vitamin E biosynthesis (tocotrienols): PWY-7436
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=RXN-14917&oldid=46600"